RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 JAKMIP3Q5VZ66 844 aa16.39■□□□□ 0.21
CCDC57-214ENST00000582040 POTEBQ6S5H4 581 aa16.39■□□□□ 0.21
CCDC57-214ENST00000582040 NEK9Q8TD19 979 aa16.39■□□□□ 0.21
CCDC57-214ENST00000582040 ZNF689Q96CS4 500 aaPredicted RBP16.39■□□□□ 0.21
CCDC57-214ENST00000582040 PABPC5Q96DU9 382 aaKnown RBP16.39■□□□□ 0.21
CCDC57-214ENST00000582040 GLT8D2Q9H1C3 349 aa16.39■□□□□ 0.21
CCDC57-214ENST00000582040 PCDHA2Q9Y5H9 948 aa16.39■□□□□ 0.21
CCDC57-214ENST00000582040 SQORQ9Y6N5 450 aa16.39■□□□□ 0.21
CCDC57-214ENST00000582040 IGSF9BQ9UPX0 1349 aa16.39■□□□□ 0.21
CCDC57-214ENST00000582040 LOXHD1Q8IVV2 1947 aa16.39■□□□□ 0.21
CCDC57-214ENST00000582040 MYO7AQ13402 2215 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 SMIM35A0A1B0GVV1 85 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 BACH1O14867 736 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 DGKIO75912 1065 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 ATG7O95352 703 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 CPA1P15085 419 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 METAP2P50579 478 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCDC57-214ENST00000582040 FGD1P98174 961 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 PAK2Q13177 524 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 COL19A1Q14993 1142 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 TMEM31Q5JXX7 168 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 MTHFD1LQ6UB35 978 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 NIPA1Q7RTP0 329 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 PLA2G4DQ86XP0 818 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 NPAS4Q8IUM7 802 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 CCDC60Q8IWA6 550 aaPredicted RBP16.38■□□□□ 0.21
CCDC57-214ENST00000582040 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
CCDC57-214ENST00000582040 LRFN3Q9BTN0 628 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 FTHL17Q9BXU8 183 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 CELF4Q9BZC1 486 aaKnown RBP16.38■□□□□ 0.21
CCDC57-214ENST00000582040 LMAN2LQ9H0V9 348 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 CLDND1Q9NY35 253 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 PADI3Q9ULW8 664 aa16.38■□□□□ 0.21
CCDC57-214ENST00000582040 IGLV3-22A0A075B6J6 115 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 IGKV6D-21A0A0A0MT36 114 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 FAM86C2PA6NEL3 165 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 GRXCR2A6NFK2 248 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 FAM86B1E9PN63 330 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
CCDC57-214ENST00000582040 FAM86B2P0C5J1 330 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 SCG2P13521 617 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 SSTR3P32745 418 aaPredicted RBP16.37■□□□□ 0.21
CCDC57-214ENST00000582040 ADD1P35611 737 aaKnown RBP16.37■□□□□ 0.21
CCDC57-214ENST00000582040 SLC26A2P50443 739 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 KRT76Q01546 638 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 APOBRQ0VD83 1088 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 PFKFB3Q16875 520 aaPredicted RBP16.37■□□□□ 0.21
CCDC57-214ENST00000582040 FAM160B1Q5W0V3 765 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 ABHD15Q6UXT9 468 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 RTN4RL1Q86UN2 441 aaPredicted RBP16.37■□□□□ 0.21
CCDC57-214ENST00000582040 GJD3Q8N144 294 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 UIMC1Q96RL1 719 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 C11orf16Q9NQ32 467 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 MRPL42Q9Y6G3 142 aaKnown RBP16.37■□□□□ 0.21
CCDC57-214ENST00000582040 KDM3AQ9Y4C1 1321 aa16.37■□□□□ 0.21
CCDC57-214ENST00000582040 ESYT2A0FGR8 921 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 ADAMTS3O15072 1205 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 HBP1O60381 514 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 MMP1P03956 469 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 TMEM266Q2M3C6 531 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 PUS10Q3MIT2 529 aaKnown RBP16.36■□□□□ 0.21
CCDC57-214ENST00000582040 PAN2Q504Q3 1202 aaKnown RBP16.36■□□□□ 0.21
CCDC57-214ENST00000582040 PDXDC2PQ6P474 469 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 Q6ZUG5 572 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 CMTR2Q8IYT2 770 aaKnown RBP16.36■□□□□ 0.21
CCDC57-214ENST00000582040 REXO1Q8N1G1 1221 aaKnown RBP16.36■□□□□ 0.21
CCDC57-214ENST00000582040 ATP8B4Q8TF62 1192 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 CRYGNQ8WXF5 182 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 BRF1Q92994 677 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
CCDC57-214ENST00000582040 ZNF302Q9NR11 478 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 GINS2Q9Y248 185 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 COL1A2P08123 1366 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 NID2Q14112 1375 aa16.36■□□□□ 0.21
CCDC57-214ENST00000582040 CCDC196A0A1B0GTZ2 297 aa16.35■□□□□ 0.21
CCDC57-214ENST00000582040 IPO5O00410 1097 aaKnown RBP16.35■□□□□ 0.21
CCDC57-214ENST00000582040 DHX15O43143 795 aaKnown RBP16.35■□□□□ 0.21
CCDC57-214ENST00000582040 STAG3L1P0CL83 205 aa16.35■□□□□ 0.21
CCDC57-214ENST00000582040 IBSPP21815 317 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-214ENST00000582040 KLRC1P26715 233 aa16.35■□□□□ 0.21
CCDC57-214ENST00000582040 PLA2G5P39877 138 aa16.35■□□□□ 0.21
CCDC57-214ENST00000582040 GATMP50440 423 aa16.35■□□□□ 0.21
CCDC57-214ENST00000582040 HYAL1Q12794 435 aa16.35■□□□□ 0.21
CCDC57-214ENST00000582040 CRIPAKQ8N1N5 446 aa16.35■□□□□ 0.21
CCDC57-214ENST00000582040 NME8Q8N427 588 aa16.35■□□□□ 0.21
CCDC57-214ENST00000582040 ZMYND12Q9H0C1 365 aa16.35■□□□□ 0.21
CCDC57-214ENST00000582040 ALG13Q9NP73 1137 aaKnown RBP16.35■□□□□ 0.21
CCDC57-214ENST00000582040 PI4K2BG5E9Z4 385 aa16.34■□□□□ 0.21
CCDC57-214ENST00000582040 CYP3A4P08684 503 aa16.34■□□□□ 0.21
CCDC57-214ENST00000582040 SETQ01105 290 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-214ENST00000582040 NFX1Q12986 1120 aaKnown RBP16.34■□□□□ 0.21
CCDC57-214ENST00000582040 PKN1Q16512 942 aa16.34■□□□□ 0.21
CCDC57-214ENST00000582040 SWSAP1Q6NVH7 229 aa16.34■□□□□ 0.21
CCDC57-214ENST00000582040 MIS18BP1Q6P0N0 1132 aa16.34■□□□□ 0.21
CCDC57-214ENST00000582040 BLOC1S2Q6QNY1 142 aa16.34■□□□□ 0.21
CCDC57-214ENST00000582040 RASGRP4Q8TDF6 673 aa16.34■□□□□ 0.21
CCDC57-214ENST00000582040 CCDC12Q8WUD4 166 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-214ENST00000582040 KCNB2Q92953 911 aa16.34■□□□□ 0.21
CCDC57-214ENST00000582040 P2RX5Q93086 422 aa16.34■□□□□ 0.21
CCDC57-214ENST00000582040 PPP1R16BQ96T49 567 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms