RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 KLRC4O43908 158 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 IGHA2P01877 340 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 KRT18P05783 430 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 SMPD1P17405 629 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 YWHABP31946 246 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 TCF7P36402 384 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 C1QTNF8P60827 252 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 ARHGAP1Q07960 439 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 IRF5Q13568 498 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 LAMC2Q13753 1193 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 HSDL1Q3SXM5 330 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 KMT5BQ4FZB7 885 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 CNNM4Q6P4Q7 775 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 C11orf57Q6ZUT1 292 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 TRMT1LQ7Z2T5 733 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 CCDC47Q96A33 483 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 RBSNQ9H1K0 784 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 ZNF302Q9NR11 478 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 DBR1Q9UK59 544 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 WDR81Q562E7 1941 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 IGKV6D-21A0A0A0MT36 114 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 NPHP3-ACAD11A0A0J9YXS1 232 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 ARHGEF35A5YM69 484 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 ZNF862O60290 1169 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 ZNF865P0CJ78 1059 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 BMP6P22004 513 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 HOXD10P28358 340 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 KCNB1Q14721 858 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 DUSP28Q4G0W2 176 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 ARSHQ5FYA8 562 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 RNF214Q8ND24 703 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 TRIM44Q96DX7 344 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 RUSC1Q9BVN2 902 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 EXOC1Q9NV70 894 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 IGSF9BQ9UPX0 1349 aa15.41■□□□□ 0.06
CDK5RAP3-219ENST00000580670 PVALEFA0A1B0GWK0 134 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 NKRFO15226 690 aaKnown RBP eCLIP15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 FKTNO75072 461 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 IDEP14735 1019 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 PRKCEQ02156 737 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 MAP2K1Q02750 393 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 TNFAIP2Q03169 654 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 RAD51AP2Q09MP3 1159 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 UTP14CQ5TAP6 766 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 MFSD14CQ5VZR4 134 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 FAM160B1Q5W0V3 765 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 RINT1Q6NUQ1 792 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 UNC13DQ70J99 1090 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 TRIB2Q92519 343 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 EMID1Q96A84 441 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 DNAJC19Q96DA6 116 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 ERO1AQ96HE7 468 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 PCYT2Q99447 389 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 BEGAINQ9BUH8 593 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 AZI2Q9H6S1 392 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 ANKEF1Q9NU02 776 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 SRRDQ9UH36 339 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 MAFBQ9Y5Q3 323 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 LOXHD1Q8IVV2 1947 aa15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 MYH9P35579 1960 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-219ENST00000580670 TMEM150BA6NC51 233 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CAVIN2O95810 425 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 RARRES1P49788 294 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ZNF165P49910 485 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 STAT5BP51692 787 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 OTUD6AQ7L8S5 288 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 OR6J1Q8NGC5 347 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 NAT10Q9H0A0 1025 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ADCY6O43306 1168 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 LGR5O75473 907 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 RHOBTB3O94955 611 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 STBD1O95210 358 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 GIT2Q14161 759 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 XKR9Q5GH70 373 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ZNF658Q5TYW1 1059 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PLA2G4FQ68DD2 849 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PADI6Q6TGC4 694 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 C1orf186Q6ZWK4 172 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ANO5Q75V66 913 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 TRMT44Q8IYL2 757 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 MLKLQ8NB16 471 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PPTC7Q8NI37 304 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 FAM200AQ8TCP9 573 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 AFAP1L1Q8TED9 768 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ZNF296Q8WUU4 475 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 AFG1LQ8WV93 481 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 GLG1Q92896 1179 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 PANK4Q9NVE7 773 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 KCND2Q9NZV8 630 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 SEPT9Q9UHD8 586 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CASP8AP2Q9UKL3 1982 aa15.39■□□□□ 0.05
CDK5RAP3-219ENST00000580670 GNRH1P01148 92 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 ATP4AP20648 1035 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 XKR3Q5GH77 459 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 CCDC65Q8IXS2 484 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 SMYD4Q8IYR2 804 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 SH2D3AQ9BRG2 576 aa15.38■□□□□ 0.05
CDK5RAP3-219ENST00000580670 REEP2Q9BRK0 252 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms