RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 POTEBQ6S5H4 581 aa16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 RUFY4Q6ZNE9 571 aa16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 ATP8B4Q8TF62 1192 aa16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 HLA-CQ95604 372 aa16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 MRPL38Q96DV4 380 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 YME1L1Q96TA2 773 aa16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 RC3H2Q9HBD1 1191 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-213ENST00000578044 IGSF9BQ9UPX0 1349 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 H3BNC9 293 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 RFXAPO00287 272 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 PDIA3P30101 505 aaKnown RBP16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 KRT76Q01546 638 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 COL19A1Q14993 1142 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 PTPROQ16827 1216 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 ZNF484Q5JVG2 852 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 ODR4Q5SWX8 454 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 GALNT17Q6IS24 598 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 PLA2G4DQ86XP0 818 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 CRIPAKQ8N1N5 446 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 FBXO22Q8NEZ5 403 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 ADAMTS19Q8TE59 1207 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 DNAJB3Q8WWF6 145 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 CLP1Q92989 425 aaKnown RBP16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 CERS4Q9HA82 394 aa16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 MAFBQ9Y5Q3 323 aaPredicted RBP16.48■□□□□ 0.23
SMARCE1-213ENST00000578044 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 M0QZ92 97 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 ENPP3O14638 875 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 CCNE2O96020 404 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 MARK3P27448 753 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 EPC2Q52LR7 807 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 MIS18BP1Q6P0N0 1132 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 ZNF689Q96CS4 500 aaPredicted RBP16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 IL17RAQ96F46 866 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 UHRF1Q96T88 793 aaPredicted RBP16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 PLVAPQ9BX97 442 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 OSBPL7Q9BZF2 842 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 LMAN2LQ9H0V9 348 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 TRPC6Q9Y210 931 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 CDY2AQ9Y6F7 541 aa16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 TCF20Q9UGU0 1960 aaKnown RBP16.47■□□□□ 0.23
SMARCE1-213ENST00000578044 NCK2O43639 380 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 GHRP10912 638 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 TIGD5Q53EQ6 642 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 NAALADL2Q58DX5 795 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 MTHFD1LQ6UB35 978 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 MOXD1Q6UVY6 613 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 BBXQ8WY36 941 aaPredicted RBP16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 RIT2Q99578 217 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 CELF4Q9BZC1 486 aaKnown RBP16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 TMEM260Q9NX78 707 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 CEP131Q9UPN4 1083 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 TRPV2Q9Y5S1 764 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
SMARCE1-213ENST00000578044 EIF5BO60841 1220 aaKnown RBP16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 CPA1P15085 419 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 JAKMIP3Q5VZ66 844 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 SPRED2Q7Z698 418 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 TMEM192Q8IY95 271 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 RDM1Q8NG50 284 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 GDPD5Q8WTR4 605 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 LENG9Q96B70 501 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 PGBD1Q96JS3 809 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 FAM167AQ96KS9 214 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 C17orf80Q9BSJ5 609 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 ZNF577Q9BSK1 485 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 ZNF302Q9NR11 478 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 PKD2L1Q9P0L9 805 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 TCEAL9Q9UHQ7 104 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 PCDHA10Q9Y5I2 948 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 ADGRA3Q8IWK6 1321 aa16.45■□□□□ 0.22
SMARCE1-213ENST00000578044 CYP3A7-CYP3A51PA0A087WV96 503 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 MAGEB2O15479 319 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 DGKIO75912 1065 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 LINC00271P0C7V0 271 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 CYP3A7P24462 503 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 TOB2Q14106 344 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 PUS10Q3MIT2 529 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 PDXDC2PQ6P474 469 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 CPLX2Q6PUV4 134 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 NPAS4Q8IUM7 802 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 CCDC60Q8IWA6 550 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 CMTR2Q8IYT2 770 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 MICALL1Q8N3F8 863 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 FIBCD1Q8N539 461 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 DAGLBQ8NCG7 672 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 P2RX5Q93086 422 aa16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 AGO3Q9H9G7 860 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-213ENST00000578044 WDR64B1ANS9 1081 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 ZBTB42B2RXF5 422 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 BACH1O14867 736 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 DEXIO95424 95 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms