RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 DGKIO75912 1065 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 CCNE2O96020 404 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 LTBRP36941 435 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 PLA2G5P39877 138 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 EXOSC10Q01780 885 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 FUT2Q10981 343 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 HYAL1Q12794 435 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 NFX1Q12986 1120 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 CEP55Q53EZ4 464 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 POTEBQ6S5H4 581 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 DHX32Q7L7V1 743 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 C11orf84Q9BUA3 381 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 CDHR5Q9HBB8 845 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 RBM28Q9NW13 759 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 PADI3Q9ULW8 664 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 PCDHA2Q9Y5H9 948 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 TRPV2Q9Y5S1 764 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 MRPL42Q9Y6G3 142 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 NFASCO94856 1347 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 FAM86B1E9PN63 330 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 C5orf67F2Z3F1 127 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 MEIS1O00470 390 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 FOSP01100 380 aaPredicted RBP9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 RB1P06400 928 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 FAM86B2P0C5J1 330 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 DNAJB1P25685 340 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 KLRC1P26715 233 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 ADD1P35611 737 aaKnown RBP9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 FGD1P98174 961 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 KRT76Q01546 638 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 PAK2Q13177 524 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 CAMK1Q14012 370 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 BMP2KLQ5H9B9 411 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 MTHFD1LQ6UB35 978 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 PLPPR4Q7Z2D5 763 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 PLA2G4DQ86XP0 818 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 ZNF689Q96CS4 500 aaPredicted RBP9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 CELF4Q9BZC1 486 aaKnown RBP9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 TMX1Q9H3N1 280 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 RC3H2Q9HBD1 1191 aaKnown RBP9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 BARHL2Q9NY43 387 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 PLAGL2Q9UPG8 496 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 HCN4Q9Y3Q4 1203 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 PCDHGC5Q9Y5F6 944 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 EVPLQ92817 2033 aa9.81□□□□□ -0.84
CTDNEP1-203ENST00000570385 ATG2AQ2TAZ0 1938 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 GPR37L1O60883 481 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 ITGB1P05556 798 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 IRS1P35568 1242 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 SREBF1P36956 1147 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 APOBRQ0VD83 1088 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 PUS10Q3MIT2 529 aaKnown RBP9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 SWSAP1Q6NVH7 229 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 PDXDC2PQ6P474 469 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 ADGRD2Q7Z7M1 963 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 RBM23Q86U06 439 aaKnown RBP9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 NPAS4Q8IUM7 802 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 CCDC60Q8IWA6 550 aaPredicted RBP9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 CKAP2LQ8IYA6 745 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 RASGRP4Q8TDF6 673 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 CLP1Q92989 425 aaKnown RBP9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 ZNF302Q9NR11 478 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 HCSTQ9UBK5 93 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 LRFN2Q9ULH4 789 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 NOC2LQ9Y3T9 749 aaKnown RBP9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 RWDD3Q9Y3V2 267 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 RALGAPA2Q2PPJ7 1873 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 IGSF9BQ9UPX0 1349 aa9.8□□□□□ -0.84
CTDNEP1-203ENST00000570385 SMIM35A0A1B0GVV1 85 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 DHX15O43143 795 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 HBP1O60381 514 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 MGEA5O60502 916 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 TBX10O75333 385 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 ATG7O95352 703 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 MMP1P03956 469 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 STAG3L1P0CL83 205 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 SCG2P13521 617 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 ATP4AP20648 1035 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 CLK2P49760 499 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 METAP2P50579 478 aaKnown RBP eCLIP9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 ZP2Q05996 745 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 AP3B2Q13367 1082 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 COL19A1Q14993 1142 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 SPOUT1Q5T280 376 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 FAM160B1Q5W0V3 765 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 MIS18BP1Q6P0N0 1132 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 ABHD15Q6UXT9 468 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 Q6ZUG5 572 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 CMTR2Q8IYT2 770 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 KIAA0319LQ8IZA0 1049 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 CRIPAKQ8N1N5 446 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 METTL13Q8N6R0 699 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 KLHL23Q8NBE8 558 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 SPPL3Q8TCT6 385 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 ATP8B4Q8TF62 1192 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 TMEM40Q8WWA1 233 aa9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 TNPO1Q92973 898 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-203ENST00000570385 PHKBQ93100 1093 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms