RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 BMPR1AP36894 532 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 PLA2G5P39877 138 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 SLC26A2P50443 739 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 TIGD5Q53EQ6 642 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 JAKMIP3Q5VZ66 844 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 POTEBQ6S5H4 581 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 ABHD15Q6UXT9 468 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 BANK1Q8NDB2 785 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 TRAPPC12Q8WVT3 735 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 CRYGNQ8WXF5 182 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 ZNF689Q96CS4 500 aaPredicted RBP21.04■□□□□ 0.96
CLN6-204ENST00000564752 ZSWIM6Q9HCJ5 1215 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 CYP46A1Q9Y6A2 500 aa21.04■□□□□ 0.96
CLN6-204ENST00000564752 FAM86B1E9PN63 330 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 CCNE2O96020 404 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 RB1P06400 928 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 CYP3A4P08684 503 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 FAM86B2P0C5J1 330 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 SCG2P13521 617 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 KCNA5P22460 613 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 MTHFD1LQ6UB35 978 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 RTN4RL1Q86UN2 441 aaPredicted RBP21.03■□□□□ 0.96
CLN6-204ENST00000564752 NME8Q8N427 588 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.03■□□□□ 0.96
CLN6-204ENST00000564752 LINC01599Q8WXQ3 324 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 CLP1Q92989 425 aaKnown RBP21.03■□□□□ 0.96
CLN6-204ENST00000564752 TRPV2Q9Y5S1 764 aa21.03■□□□□ 0.96
CLN6-204ENST00000564752 SMIM35A0A1B0GVV1 85 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 M0QZ92 97 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 DHX15O43143 795 aaKnown RBP21.02■□□□□ 0.96
CLN6-204ENST00000564752 CTNNB1P35222 781 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 AKAP17AQ02040 695 aaKnown RBP21.02■□□□□ 0.96
CLN6-204ENST00000564752 TMEM62Q0P6H9 643 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 TCEAL5Q5H9L2 206 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 PLA2G4DQ86XP0 818 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 CRIPAKQ8N1N5 446 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 FTHL17Q9BXU8 183 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 CELF4Q9BZC1 486 aaKnown RBP21.02■□□□□ 0.96
CLN6-204ENST00000564752 UPF3BQ9BZI7 483 aaKnown RBP21.02■□□□□ 0.96
CLN6-204ENST00000564752 TM6SF1Q9BZW5 370 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 ZMYND12Q9H0C1 365 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 RWDD3Q9Y3V2 267 aa21.02■□□□□ 0.96
CLN6-204ENST00000564752 ADGRA3Q8IWK6 1321 aa21.02■□□□□ 0.95
CLN6-204ENST00000564752 IGLV3-22A0A075B6J6 115 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 ESYT2A0FGR8 921 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 DDX39AO00148 427 aaKnown RBP21.01■□□□□ 0.95
CLN6-204ENST00000564752 DGKIO75912 1065 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 TOB2Q14106 344 aaPredicted RBP21.01■□□□□ 0.95
CLN6-204ENST00000564752 PKN1Q16512 942 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 NEK9Q8TD19 979 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 CCDC12Q8WUD4 166 aaPredicted RBP21.01■□□□□ 0.95
CLN6-204ENST00000564752 PHKBQ93100 1093 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 NSUN3Q9H649 340 aaKnown RBP21.01■□□□□ 0.95
CLN6-204ENST00000564752 EPHX3Q9H6B9 360 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 PADI3Q9ULW8 664 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 IGSF9BQ9UPX0 1349 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 KDM3AQ9Y4C1 1321 aa21.01■□□□□ 0.95
CLN6-204ENST00000564752 BACH1O14867 736 aa21■□□□□ 0.95
CLN6-204ENST00000564752 ADAMTS3O15072 1205 aa21■□□□□ 0.95
CLN6-204ENST00000564752 PRPF3O43395 683 aaKnown RBP21■□□□□ 0.95
CLN6-204ENST00000564752 HBP1O60381 514 aa21■□□□□ 0.95
CLN6-204ENST00000564752 KLRC1P26715 233 aa21■□□□□ 0.95
CLN6-204ENST00000564752 PDIA3P30101 505 aaKnown RBP21■□□□□ 0.95
CLN6-204ENST00000564752 EVCP57679 992 aa21■□□□□ 0.95
CLN6-204ENST00000564752 CCT2P78371 535 aaKnown RBP21■□□□□ 0.95
CLN6-204ENST00000564752 BTG3Q14201 252 aaPredicted RBP21■□□□□ 0.95
CLN6-204ENST00000564752 COL19A1Q14993 1142 aa21■□□□□ 0.95
CLN6-204ENST00000564752 FAM160B1Q5W0V3 765 aa21■□□□□ 0.95
CLN6-204ENST00000564752 MCTP2Q6DN12 878 aa21■□□□□ 0.95
CLN6-204ENST00000564752 CCDC60Q8IWA6 550 aaPredicted RBP21■□□□□ 0.95
CLN6-204ENST00000564752 ATP8B4Q8TF62 1192 aa21■□□□□ 0.95
CLN6-204ENST00000564752 C11orf84Q9BUA3 381 aaPredicted RBP21■□□□□ 0.95
CLN6-204ENST00000564752 RNF26Q9BY78 433 aaPredicted RBP21■□□□□ 0.95
CLN6-204ENST00000564752 C6orf50Q9HD87 102 aa21■□□□□ 0.95
CLN6-204ENST00000564752 CD320Q9NPF0 282 aa21■□□□□ 0.95
CLN6-204ENST00000564752 IPO5O00410 1097 aaKnown RBP20.99■□□□□ 0.95
CLN6-204ENST00000564752 GRM6O15303 877 aa20.99■□□□□ 0.95
CLN6-204ENST00000564752 KRT76Q01546 638 aa20.99■□□□□ 0.95
CLN6-204ENST00000564752 PAK2Q13177 524 aa20.99■□□□□ 0.95
CLN6-204ENST00000564752 PUS10Q3MIT2 529 aaKnown RBP20.99■□□□□ 0.95
CLN6-204ENST00000564752 PTCRAQ6ISU1 281 aaPredicted RBP20.99■□□□□ 0.95
CLN6-204ENST00000564752 SWSAP1Q6NVH7 229 aa20.99■□□□□ 0.95
CLN6-204ENST00000564752 FAM178BQ8IXR5 827 aa20.99■□□□□ 0.95
CLN6-204ENST00000564752 PABPC5Q96DU9 382 aaKnown RBP20.99■□□□□ 0.95
CLN6-204ENST00000564752 SLC26A6Q9BXS9 759 aa20.99■□□□□ 0.95
CLN6-204ENST00000564752 LMAN2LQ9H0V9 348 aa20.99■□□□□ 0.95
CLN6-204ENST00000564752 NCOA5Q9HCD5 579 aaKnown RBP20.99■□□□□ 0.95
CLN6-204ENST00000564752 ZNF302Q9NR11 478 aa20.99■□□□□ 0.95
CLN6-204ENST00000564752 TTC3P53804 2025 aa20.99■□□□□ 0.95
CLN6-204ENST00000564752 GRXCR2A6NFK2 248 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 IFNAR1P17181 557 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 ATP4AP20648 1035 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 GNA11P29992 359 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 NTRK3Q16288 839 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 ZNF484Q5JVG2 852 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 MIS18BP1Q6P0N0 1132 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 PDXDC2PQ6P474 469 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 NPAS4Q8IUM7 802 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 KIAA0319LQ8IZA0 1049 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 REXO1Q8N1G1 1221 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms