RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 TRPV2Q9Y5S1 764 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 SQORQ9Y6N5 450 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 KIAA1671Q9BY89 1806 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 IGSF9BQ9UPX0 1349 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 LOXHD1Q8IVV2 1947 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 IGKV6D-21A0A0A0MT36 114 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 POTEB3A0JP26 581 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PI4K2BG5E9Z4 385 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TMEM31Q5JXX7 168 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 POTEBQ6S5H4 581 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 GJD3Q8N144 294 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PADI3Q9ULW8 664 aa19.04■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TRIOO75962 3097 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 SMIM35A0A1B0GVV1 85 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 FAM86C2PA6NEL3 165 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 FAM86B1E9PN63 330 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 DDX39AO00148 427 aaKnown RBP19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 ADAMTS3O15072 1205 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 FAM86B2P0C5J1 330 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 LTBRP36941 435 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PLA2G5P39877 138 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PUS10Q3MIT2 529 aaKnown RBP19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 MTHFD1LQ6UB35 978 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CENPQQ7L2Z9 268 aaPredicted RBP19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 NIPA1Q7RTP0 329 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CRYGNQ8WXF5 182 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TNPO1Q92973 898 aaKnown RBP19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 FTHL17Q9BXU8 183 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CELF4Q9BZC1 486 aaKnown RBP19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 LMAN2LQ9H0V9 348 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CLDND1Q9NY35 253 aa19.03■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 KDM3AQ9Y4C1 1321 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 IGLV3-22A0A075B6J6 115 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 M0QZ92 97 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 DHX15O43143 795 aaKnown RBP19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 GPR37L1O60883 481 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CDC45O75419 566 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CPA1P15085 419 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 ADD1P35611 737 aaKnown RBP19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 RCAN1P53805 252 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PAK2Q13177 524 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 KRT32Q14532 448 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PFKFB3Q16875 520 aaPredicted RBP19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CTC1Q2NKJ3 1217 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 JAKMIP3Q5VZ66 844 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 ABHD15Q6UXT9 468 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 EP400NLQ6ZTU2 488 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CCDC60Q8IWA6 550 aaPredicted RBP19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 GLT8D2Q9H1C3 349 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TMX1Q9H3N1 280 aa19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 MRPL42Q9Y6G3 142 aaKnown RBP19.02■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CSPG5O95196 566 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 MMP1P03956 469 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 SSTR3P32745 418 aaPredicted RBP19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ZNF76P36508 570 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 SLC26A2P50443 739 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 KRT76Q01546 638 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 HYAL1Q12794 435 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 CAMK1Q14012 370 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 TMEM266Q2M3C6 531 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 NPAS4Q8IUM7 802 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 CMTR2Q8IYT2 770 aaKnown RBP19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 UIMC1Q96RL1 719 aa19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ALG13Q9NP73 1137 aaKnown RBP19.01■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 WDFY4Q6ZS81 3184 aa19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 BACH1O14867 736 aa19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 HMGB1P09429 215 aaKnown RBP19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 KLRC1P26715 233 aa19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 GTF2F1P35269 517 aaKnown RBP eCLIP19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 METAP2P50579 478 aaKnown RBP eCLIP19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 DLX2Q07687 328 aaPredicted RBP19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 APOBRQ0VD83 1088 aa19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PLA2G4DQ86XP0 818 aa19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 NME8Q8N427 588 aa19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ATP8B4Q8TF62 1192 aa19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PLVAPQ9BX97 442 aa19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 NAP1L2Q9ULW6 460 aaPredicted RBP19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PLAGL2Q9UPG8 496 aa19■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 NID2Q14112 1375 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ZBTB42B2RXF5 422 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 IPO5O00410 1097 aaKnown RBP18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 NCK2O43639 380 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 HBP1O60381 514 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 CYP3A4P08684 503 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 SCG2P13521 617 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ATP4AP20648 1035 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 DNAJB1P25685 340 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 GATMP50440 423 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PKN1Q16512 942 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PAN2Q504Q3 1202 aaKnown RBP18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 FAM160B1Q5W0V3 765 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 Q6ZUG5 572 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 KIAA0319LQ8IZA0 1049 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 TMEM40Q8WWA1 233 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 KCNB2Q92953 911 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 P2RX5Q93086 422 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 FAM122AQ96E09 287 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ZMYND12Q9H0C1 365 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 CDHR5Q9HBB8 845 aa18.99■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ZNF302Q9NR11 478 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms