RNA–Protein interactions for RNA: ENST00000561208.5

MEIS2-222, Transcript of Meis homeobox 2, human

TSL 1 (best) BASIC

Gene MEIS2, Length 4,822 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS2-222	ENST00000561208	TGS1	Q96RS0	853 aa	Known RBP	11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208	TMEM60	Q9H2L4	133 aa		11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208	USP40	Q9NVE5	1235 aa		11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208	TFR2	Q9UP52	801 aa		11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208		A0A0G2JLW4	131 aa		11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208	RASSF10	A6NK89	507 aa		11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208	ZYX	Q15942	572 aa	Known RBP	11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208	OR2W6P	Q8NHA6	318 aa		11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208	RAD54L	Q92698	747 aa		11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208	TRIM9	Q9C026	710 aa		11.45	□□□□□ -0.58
MEIS2-222	ENST00000561208	NT5C2	P49902	561 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	CDC37	Q16543	378 aa	Predicted RBP	11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	BSPRY	Q5W0U4	402 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	KDM7A	Q6ZMT4	941 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	ZNF804B	A4D1E1	1349 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	RHOBTB3	O94955	611 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	ARHGAP4	P98171	946 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	COASY	Q13057	564 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	PPP2R5D	Q14738	602 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	SLC18A3	Q16572	532 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	PACS2	Q86VP3	889 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	PHF20	Q9BVI0	1012 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	AMN	Q9BXJ7	453 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	CCSER1	Q9C0I3	900 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	LCMT1	Q9UIC8	334 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	KCNG1	Q9UIX4	513 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208		A0A0G2JND7	137 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	STAM2	O75886	525 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	CHN1	P15882	459 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	NR1H3	Q13133	447 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	SLFN13	Q68D06	897 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	TTBK2	Q6IQ55	1244 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	NUDCD1	Q96RS6	583 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	TEKT3	Q9BXF9	490 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	TRIM55	Q9BYV6	548 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	A2ML1	A8K2U0	1454 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	AGT	P01019	485 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	PLCB4	Q15147	1175 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	DBN1	Q16643	649 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	CYB5D1	Q6P9G0	228 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	TTC16	Q8NEE8	873 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	MYCBPAP	Q8TBZ2	947 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	ARL8A	Q96BM9	186 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	GRAMD1A	Q96CP6	724 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	THRAP3	Q9Y2W1	955 aa	Known RBP	11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	ARL2BP	Q9Y2Y0	163 aa		11.44	□□□□□ -0.58
MEIS2-222	ENST00000561208	RAD51C	O43502	376 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	PLS3	P13797	630 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	MXI1	P50539	228 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	DHX34	Q14147	1143 aa	Known RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	UBE2S	Q16763	222 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	TRAPPC3L	Q5T215	181 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	PAPD7	Q5XG87	772 aa	Known RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	PARVG	Q9HBI0	331 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	ZFP69B	Q9UJL9	534 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	INO80	Q9ULG1	1556 aa	Predicted RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	LRRIQ1	Q96JM4	1722 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	SNAP23	O00161	211 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	SNX16	P57768	344 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	MKRN3	Q13064	507 aa	Known RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	XKR9	Q5GH70	373 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	SPATA21	Q7Z572	469 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	ZNF354C	Q86Y25	554 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	CPXCR1	Q8N123	301 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	PCIF1	Q9H4Z3	704 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	FGFR1OP2	Q9NVK5	253 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	GGT7	Q9UJ14	662 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	PNMA2	Q9UL42	364 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	MAD1L1	Q9Y6D9	718 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	PDS5A	Q29RF7	1337 aa	Known RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	CCT8L1P	A6NM43	557 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	CREB3	O43889	395 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	POLR2M	P0CAP2	368 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	POLR2B	P30876	1174 aa	Known RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	GTF2I	P78347	998 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	MECOM	Q03112	1051 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	DYNC1I2	Q13409	638 aa	Known RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	RNF207	Q6ZRF8	634 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	CYTH2	Q99418	400 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	PRMT1	Q99873	361 aa	Known RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	ENO4	A6NNW6	628 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	TTI1	O43156	1089 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	NMT2	O60551	498 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	CAV1	Q03135	178 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	CENPU	Q71F23	418 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	TRPM8	Q7Z2W7	1104 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	NLRP7	Q8WX94	980 aa		11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	ABTB1	Q969K4	478 aa	Predicted RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208	MRPL47	Q9HD33	250 aa	Known RBP	11.43	□□□□□ -0.58
MEIS2-222	ENST00000561208		A0A1W2PQJ5	194 aa		11.42	□□□□□ -0.58
MEIS2-222	ENST00000561208	TCP11X1	B4DZS4	312 aa		11.42	□□□□□ -0.58
MEIS2-222	ENST00000561208	MAP2K7	O14733	419 aa		11.42	□□□□□ -0.58
MEIS2-222	ENST00000561208	HSPA9	P38646	679 aa	Known RBP	11.42	□□□□□ -0.58
MEIS2-222	ENST00000561208	LIG4	P49917	911 aa		11.42	□□□□□ -0.58
MEIS2-222	ENST00000561208	YWHAE	P62258	255 aa	Known RBP	11.42	□□□□□ -0.58
MEIS2-222	ENST00000561208	GPC5	P78333	572 aa		11.42	□□□□□ -0.58
MEIS2-222	ENST00000561208	NXN	Q6DKJ4	435 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms