RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CTDP1Q9Y5B0 961 aaPredicted RBP7.77□□□□□ -1.17
HERC1-208ENST00000560462 F6X3S4 739 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 CAPNS1P04632 268 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 ADORA1P30542 326 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 THPOP40225 353 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 CCR10P46092 362 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 NRLP54845 237 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 ERVFC1P60507 584 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 SF3A2Q15428 464 aaKnown RBP7.76□□□□□ -1.17
HERC1-208ENST00000560462 FAM83BQ5T0W9 1011 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 TMEM179Q6ZVK1 233 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 ZNF843Q8N446 348 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 ANKRD44Q8N8A2 993 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 STK32AQ8WU08 396 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 AFG1LQ8WV93 481 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 SHDQ96IW2 340 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 SLF1Q9BQI6 1058 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 HOMER2Q9NSB8 354 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 CEP126Q9P2H0 1117 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 HDAC6Q9UBN7 1215 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 SALL2Q9Y467 1007 aaPredicted RBP7.76□□□□□ -1.17
HERC1-208ENST00000560462 FBN2P35556 2912 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 CELSR3Q9NYQ7 3312 aa7.76□□□□□ -1.17
HERC1-208ENST00000560462 PIK3CDO00329 1044 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 ARHGAP33O14559 1287 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 TREHO43280 583 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 ACTN4O43707 911 aaKnown RBP7.75□□□□□ -1.17
HERC1-208ENST00000560462 HYAL3O43820 417 aaPredicted RBP7.75□□□□□ -1.17
HERC1-208ENST00000560462 ZBED4O75132 1171 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 DGKIO75912 1065 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 SKIP12755 728 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 MAGEA9P43362 315 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 ICA1Q05084 483 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 RARS2Q5T160 578 aaKnown RBP7.75□□□□□ -1.17
HERC1-208ENST00000560462 PLPP4Q5VZY2 271 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 NAA16Q6N069 864 aaPredicted RBP7.75□□□□□ -1.17
HERC1-208ENST00000560462 KIAA1211LQ6NV74 962 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 CLEC10AQ8IUN9 316 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 SIAH1Q8IUQ4 282 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 CCDC146Q8IYE0 955 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 CMTR2Q8IYT2 770 aaKnown RBP7.75□□□□□ -1.17
HERC1-208ENST00000560462 PRR14Q9BWN1 585 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 BCAS3Q9H6U6 928 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 RAVER2Q9HCJ3 691 aaKnown RBP7.75□□□□□ -1.17
HERC1-208ENST00000560462 PRMT8Q9NR22 394 aaPredicted RBP7.75□□□□□ -1.17
HERC1-208ENST00000560462 AAASQ9NRG9 546 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 LRP2BPQ9P2M1 347 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 TICRRQ7Z2Z1 1910 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 RELNP78509 3460 aa7.75□□□□□ -1.17
HERC1-208ENST00000560462 PATJQ8NI35 1801 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 FSCN2O14926 492 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 NKRFO15226 690 aaKnown RBP eCLIP7.74□□□□□ -1.17
HERC1-208ENST00000560462 F12P00748 615 aaPredicted RBP7.74□□□□□ -1.17
HERC1-208ENST00000560462 NBPF7P0C2Y1 421 aaPredicted RBP7.74□□□□□ -1.17
HERC1-208ENST00000560462 STARD6P59095 220 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 PDE4BQ07343 736 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 SIM2Q14190 667 aaPredicted RBP7.74□□□□□ -1.17
HERC1-208ENST00000560462 PPP2R5BQ15173 497 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 SH3PXD2AQ5TCZ1 1133 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 CCDC149Q6ZUS6 474 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 SLC44A3Q8N4M1 653 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 PRPF38AQ8NAV1 312 aaKnown RBP7.74□□□□□ -1.17
HERC1-208ENST00000560462 RSAD2Q8WXG1 361 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 ACAD9Q9H845 621 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 A1CFQ9NQ94 594 aaKnown RBP7.74□□□□□ -1.17
HERC1-208ENST00000560462 HMG20BQ9P0W2 317 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 KLK13Q9UKR3 277 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 SLC27A5Q9Y2P5 690 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 HCFC2Q9Y5Z7 792 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 LAMA1P25391 3075 aa7.74□□□□□ -1.17
HERC1-208ENST00000560462 FRMPD2Q68DX3 1309 aaPredicted RBP7.74□□□□□ -1.17
HERC1-208ENST00000560462 FOCADQ5VW36 1801 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 FBN3Q75N90 2809 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 KANSL1LA0AUZ9 987 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 ATXN7O15265 892 aaPredicted RBP7.73□□□□□ -1.17
HERC1-208ENST00000560462 ALDH1L1O75891 902 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 USP5P45974 858 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 PSEN2P49810 448 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 CALD1Q05682 793 aaKnown RBP7.73□□□□□ -1.17
HERC1-208ENST00000560462 UBXN2BQ14CS0 331 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 PTPN14Q15678 1187 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 PAN2Q504Q3 1202 aaKnown RBP7.73□□□□□ -1.17
HERC1-208ENST00000560462 PI16Q6UXB8 463 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 DNAJC14Q6Y2X3 702 aaPredicted RBP7.73□□□□□ -1.17
HERC1-208ENST00000560462 ADGRA1Q86SQ6 560 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 C12orf76Q8N812 135 aaPredicted RBP7.73□□□□□ -1.17
HERC1-208ENST00000560462 ZNF513Q8N8E2 541 aaPredicted RBP7.73□□□□□ -1.17
HERC1-208ENST00000560462 SPATA5Q8NB90 893 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 MORC4Q8TE76 937 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 KAT2BQ92831 832 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 KLHL5Q96PQ7 755 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 USB1Q9BQ65 265 aaKnown RBP7.73□□□□□ -1.17
HERC1-208ENST00000560462 OSBPL7Q9BZF2 842 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 ENTPD7Q9NQZ7 604 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 TMEM260Q9NX78 707 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 PCDHB12Q9Y5F1 795 aa7.73□□□□□ -1.17
HERC1-208ENST00000560462 FAM170BA6NMN3 283 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 HIDE1A8MVS5 230 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 F5H6K3 240 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 FGF18O76093 207 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms