RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 SMCO2A6NFE2 343 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 MEIS1O00470 390 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 NCK2O43639 380 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 ATG7O95352 703 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 STAT5BP51692 787 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 SETQ01105 290 aaPredicted RBP15.43■□□□□ 0.06
SMAD3-214ENST00000560402 COL19A1Q14993 1142 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 PLCB4Q15147 1175 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 FAM160B1Q5W0V3 765 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 NPAS4Q8IUM7 802 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 NME8Q8N427 588 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 NEK9Q8TD19 979 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 CCDC12Q8WUD4 166 aaPredicted RBP15.43■□□□□ 0.06
SMAD3-214ENST00000560402 ZNF689Q96CS4 500 aaPredicted RBP15.43■□□□□ 0.06
SMAD3-214ENST00000560402 PLVAPQ9BX97 442 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 AGO4Q9HCK5 861 aaKnown RBP15.43■□□□□ 0.06
SMAD3-214ENST00000560402 PCDHA2Q9Y5H9 948 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 COL1A2P08123 1366 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 WDR81Q562E7 1941 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 IGSF9BQ9UPX0 1349 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 POTEB3A0JP26 581 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 ENPP3O14638 875 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 ST18O60284 1047 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 LINC00271P0C7V0 271 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 ARP10275 920 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 ZNF76P36508 570 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 BMPR1AP36894 532 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 METAP2P50579 478 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMAD3-214ENST00000560402 ITGB3BPQ13352 177 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-214ENST00000560402 PFKFB3Q16875 520 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-214ENST00000560402 ADCK5Q3MIX3 580 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 TCEAL5Q5H9L2 206 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 POTEBQ6S5H4 581 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 FAM178BQ8IXR5 827 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 CMTR2Q8IYT2 770 aaKnown RBP15.42■□□□□ 0.06
SMAD3-214ENST00000560402 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-214ENST00000560402 PGBD1Q96JS3 809 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 TCEANC2Q96MN5 208 aa15.42■□□□□ 0.06
SMAD3-214ENST00000560402 FAM49AQ9H0Q0 323 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-214ENST00000560402 V9GY48 417 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-214ENST00000560402 IGKV6D-21A0A0A0MT36 114 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 HBP1O60381 514 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 DGKIO75912 1065 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 MMP1P03956 469 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 STAG3L1P0CL83 205 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 SCG2P13521 617 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 CD52P31358 61 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 ANAPC15P60006 121 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 FGD1P98174 961 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 PAK2Q13177 524 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 BTG3Q14201 252 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-214ENST00000560402 NAALADL2Q58DX5 795 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 TMEM31Q5JXX7 168 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 ODR4Q5SWX8 454 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 PTCRAQ6ISU1 281 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-214ENST00000560402 RASEFQ8IZ41 740 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 CYP2W1Q8TAV3 490 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 LINC01599Q8WXQ3 324 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 P2RX5Q93086 422 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 AGO3Q9H9G7 860 aaKnown RBP15.41■□□□□ 0.06
SMAD3-214ENST00000560402 FAM217BQ9NTX9 383 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-214ENST00000560402 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-214ENST00000560402 TCEAL9Q9UHQ7 104 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 ARIH1Q9Y4X5 557 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-214ENST00000560402 EVPLQ92817 2033 aa15.41■□□□□ 0.06
SMAD3-214ENST00000560402 FNDC1Q4ZHG4 1894 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-214ENST00000560402 CYP3A4P08684 503 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 CDC27P30260 824 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 MIS18BP1Q6P0N0 1132 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 MTHFD1LQ6UB35 978 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 ABHD15Q6UXT9 468 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 PLA2G4DQ86XP0 818 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 ATP8B4Q8TF62 1192 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 CRYGNQ8WXF5 182 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 KCNB2Q92953 911 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 PPP2R3CQ969Q6 453 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 CELF4Q9BZC1 486 aaKnown RBP15.4■□□□□ 0.06
SMAD3-214ENST00000560402 ZMYND12Q9H0C1 365 aa15.4■□□□□ 0.06
SMAD3-214ENST00000560402 MYO7AQ13402 2215 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 GRXCR2A6NFK2 248 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 PI4K2BG5E9Z4 385 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 RBAK-RBAKDNI3L0D1 243 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 BACH1O14867 736 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 HSP90AA1P07900 732 aaKnown RBP15.39■□□□□ 0.05
SMAD3-214ENST00000560402 IL9P15248 144 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 GNA11P29992 359 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 KRT76Q01546 638 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 ZNF484Q5JVG2 852 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 GJD3Q8N144 294 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 REXO1Q8N1G1 1221 aaKnown RBP15.39■□□□□ 0.05
SMAD3-214ENST00000560402 FBXL16Q8N461 479 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 CCDC148Q8NFR7 591 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 TRAPPC12Q8WVT3 735 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 EPHX3Q9H6B9 360 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 C6orf50Q9HD87 102 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 ZNF302Q9NR11 478 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 TBC1D22BQ9NU19 505 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 TMEM260Q9NX78 707 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 PRKAG3Q9UGI9 489 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 NAP1L2Q9ULW6 460 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms