RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 METAP2P50579 478 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMAD3-209ENST00000558894 MRPS6P82932 125 aaKnown RBP6.33□□□□□ -1.4
SMAD3-209ENST00000558894 CAMK1Q14012 370 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 NPY5RQ15761 445 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 EPC2Q52LR7 807 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 JAKMIP3Q5VZ66 844 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 TAF2Q6P1X5 1199 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 SYNE3Q6ZMZ3 975 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 CCDC60Q8IWA6 550 aaPredicted RBP6.33□□□□□ -1.4
SMAD3-209ENST00000558894 MYOCDQ8IZQ8 938 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 MICALL1Q8N3F8 863 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 APBB2Q92870 758 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 KHSRPQ92945 711 aaKnown RBP eCLIP6.33□□□□□ -1.41e-6■■□□□ 12
SMAD3-209ENST00000558894 PHKBQ93100 1093 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 ZBED2Q9BTP6 218 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 IFIH1Q9BYX4 1025 aaKnown RBP6.33□□□□□ -1.4
SMAD3-209ENST00000558894 TMX1Q9H3N1 280 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 CDHR5Q9HBB8 845 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 ZSWIM6Q9HCJ5 1215 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 CD320Q9NPF0 282 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 PCDHA2Q9Y5H9 948 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 CDY2AQ9Y6F7 541 aa6.33□□□□□ -1.4
SMAD3-209ENST00000558894 IGSF9BQ9UPX0 1349 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 KDM3AQ9Y4C1 1321 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 MYO7AQ13402 2215 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 SMIM35A0A1B0GVV1 85 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 RRN3P2A6NIE6 340 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 C5orf67F2Z3F1 127 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 EPB41L2O43491 1005 aaKnown RBP6.32□□□□□ -1.4
SMAD3-209ENST00000558894 GTPBP6O43824 516 aaPredicted RBP6.32□□□□□ -1.4
SMAD3-209ENST00000558894 PPFIA3O75145 1194 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 DGKIO75912 1065 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 UPP2O95045 317 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 IFNAR1P17181 557 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 CD52P31358 61 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 CIITAP33076 1130 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 STAT5BP51692 787 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 IGBP1P78318 339 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 TMEM62Q0P6H9 643 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 BLOC1S2Q6QNY1 142 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 MTHFD1LQ6UB35 978 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 B3GNT9Q6UX72 402 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 RUFY3Q7L099 469 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 TMEM192Q8IY95 271 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 KIAA0319LQ8IZA0 1049 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 LINC01465Q8N7H1 131 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 NEK9Q8TD19 979 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 RASGRP4Q8TDF6 673 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 TMEM40Q8WWA1 233 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 GLG1Q92896 1179 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 UIMC1Q96RL1 719 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 UHRF1Q96T88 793 aaPredicted RBP6.32□□□□□ -1.4
SMAD3-209ENST00000558894 RNF26Q9BY78 433 aaPredicted RBP6.32□□□□□ -1.4
SMAD3-209ENST00000558894 NCOA5Q9HCD5 579 aaKnown RBP6.32□□□□□ -1.4
SMAD3-209ENST00000558894 PADI3Q9ULW8 664 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 COG5Q9UP83 839 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 MAFBQ9Y5Q3 323 aaPredicted RBP6.32□□□□□ -1.4
SMAD3-209ENST00000558894 SQORQ9Y6N5 450 aa6.32□□□□□ -1.4
SMAD3-209ENST00000558894 TRIOO75962 3097 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 POTEB3A0JP26 581 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 DDX39AO00148 427 aaKnown RBP6.31□□□□□ -1.4
SMAD3-209ENST00000558894 IPO5O00410 1097 aaKnown RBP6.31□□□□□ -1.4
SMAD3-209ENST00000558894 GRM6O15303 877 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 MSH4O15457 936 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 MGEA5O60502 916 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 STBD1O95210 358 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 C22orf31O95567 290 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 DNAJB1P25685 340 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 KLRC1P26715 233 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 LTBRP36941 435 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 SLC26A2P50443 739 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 CCT2P78371 535 aaKnown RBP6.31□□□□□ -1.4
SMAD3-209ENST00000558894 SWSAP1Q6NVH7 229 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 POTEBQ6S5H4 581 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 PLA2G4DQ86XP0 818 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 REXO1Q8N1G1 1221 aaKnown RBP6.31□□□□□ -1.4
SMAD3-209ENST00000558894 FBXO22Q8NEZ5 403 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.31□□□□□ -1.4
SMAD3-209ENST00000558894 ATP8B4Q8TF62 1192 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 SLC5A5Q92911 643 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 CLP1Q92989 425 aaKnown RBP6.31□□□□□ -1.4
SMAD3-209ENST00000558894 HLA-CQ95604 372 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 GJA10Q969M2 543 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 MRPL38Q96DV4 380 aaKnown RBP6.31□□□□□ -1.4
SMAD3-209ENST00000558894 IL17RAQ96F46 866 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 CCDC136Q96JN2 1154 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 MBOAT7Q96N66 472 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 AIFM3Q96NN9 605 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 SAMD11Q96NU1 681 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 CEP89Q96ST8 783 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 SDF4Q9BRK5 362 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 CELF4Q9BZC1 486 aaKnown RBP6.31□□□□□ -1.4
SMAD3-209ENST00000558894 TM6SF1Q9BZW5 370 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 FAM49AQ9H0Q0 323 aaPredicted RBP6.31□□□□□ -1.4
SMAD3-209ENST00000558894 GLT8D2Q9H1C3 349 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 C6orf50Q9HD87 102 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 C11orf16Q9NQ32 467 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 VPS54Q9P1Q0 977 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 TRPV2Q9Y5S1 764 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms