RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 WWC2Q6AWC2 1192 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 PLPPR4Q7Z2D5 763 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 TEX2Q8IWB9 1127 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 ADHFE1Q8IWW8 467 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 CCDC82Q8N4S0 544 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 P2RX5Q93086 422 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 MXRA8Q9BRK3 442 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 SLC9A2Q9UBY0 812 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 PLAGL2Q9UPG8 496 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 PCDHA2Q9Y5H9 948 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 SLC12A7Q9Y666 1083 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 MRPL42Q9Y6G3 142 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 MYO7AQ13402 2215 aa12.25□□□□□ -0.45
HNRNPC-230ENST00000557201 IGSF9BQ9UPX0 1349 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 KDM3AQ9Y4C1 1321 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 IGKV6D-21A0A0A0MT36 114 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 TBX10O75333 385 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 ARP10275 920 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 DNAJB1P25685 340 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 GTF2F1P35269 517 aaKnown RBP eCLIP12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 IGBP1P78318 339 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 ITGB3BPQ13352 177 aaPredicted RBP12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 BTG3Q14201 252 aaPredicted RBP12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 KRT32Q14532 448 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 HEATR3Q7Z4Q2 680 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 CMTR2Q8IYT2 770 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 TRAPPC12Q8WVT3 735 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 FTHL17Q9BXU8 183 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 FAM49AQ9H0Q0 323 aaPredicted RBP12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 TMX1Q9H3N1 280 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 RIC8AQ9NPQ8 531 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 PADI3Q9ULW8 664 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 FAM50BQ9Y247 325 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 TRPV2Q9Y5S1 764 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 C5orf42Q9H799 3197 aa12.24□□□□□ -0.45
HNRNPC-230ENST00000557201 SMIM35A0A1B0GVV1 85 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 MEIS1O00470 390 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 MBTPS2O43462 519 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 DCXO43602 365 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 CLK2P49760 499 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 ACTR2P61160 394 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 EXOSC10Q01780 885 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 ADAM15Q13444 863 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 CEP55Q53EZ4 464 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 NAALADL2Q58DX5 795 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 IER5Q5VY09 327 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 APOA5Q6Q788 366 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 MICU3Q86XE3 530 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 NPAS4Q8IUM7 802 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 SPPL3Q8TCT6 385 aa12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 AGO4Q9HCK5 861 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 ALG13Q9NP73 1137 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-230ENST00000557201 STXBP3O00186 592 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 LINC01565O15544 149 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 CCNE2O96020 404 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 ITGB1P05556 798 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 IRS1P35568 1242 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 STAT5BP51692 787 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 ANAPC15P60006 121 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 TMEM62Q0P6H9 643 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 PPP1R18Q6NYC8 613 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 EP400NLQ6ZTU2 488 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 NME8Q8N427 588 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 CRYGNQ8WXF5 182 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 PGBD1Q96JS3 809 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 MSLNLQ96KJ4 702 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 ANO3Q9BYT9 981 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 BACH2Q9BYV9 841 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 CELF4Q9BZC1 486 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 AZI2Q9H6S1 392 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 SNX14Q9Y5W7 946 aa12.22□□□□□ -0.45
HNRNPC-230ENST00000557201 ZBTB42B2RXF5 422 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 EYA4O95677 639 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 FOSP01100 380 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 HMGB1P09429 215 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 SREBF1P36956 1147 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 SLC26A2P50443 739 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 SMAD4Q13485 552 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 MTHFD1LQ6UB35 978 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 ABHD15Q6UXT9 468 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 FAM43BQ6ZT52 329 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 NIPA1Q7RTP0 329 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 TNPO1Q92973 898 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 NEK1Q96PY6 1258 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 SDF4Q9BRK5 362 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 RBM28Q9NW13 759 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 TRPC6Q9Y210 931 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 KIAA1671Q9BY89 1806 aa12.21□□□□□ -0.45
HNRNPC-230ENST00000557201 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
HNRNPC-230ENST00000557201 DHX15O43143 795 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-230ENST00000557201 MGEA5O60502 916 aa12.2□□□□□ -0.46
HNRNPC-230ENST00000557201 SCG2P13521 617 aa12.2□□□□□ -0.46
HNRNPC-230ENST00000557201 ATP4AP20648 1035 aa12.2□□□□□ -0.46
HNRNPC-230ENST00000557201 PSMA5P28066 241 aa12.2□□□□□ -0.46
HNRNPC-230ENST00000557201 GATMP50440 423 aa12.2□□□□□ -0.46
HNRNPC-230ENST00000557201 NAPAP54920 295 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms