RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 PTCRAQ6ISU1 281 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 NIPA1Q7RTP0 329 aa17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 RTN4RL1Q86UN2 441 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 CRYGNQ8WXF5 182 aa17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 LRFN3Q9BTN0 628 aa17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 C11orf84Q9BUA3 381 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 GLT8D2Q9H1C3 349 aa17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 TMEM260Q9NX78 707 aa17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 TRPV2Q9Y5S1 764 aa17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 IGSF9BQ9UPX0 1349 aa17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 KDM3AQ9Y4C1 1321 aa17.89■□□□□ 0.45
ARHGEF40-205ENST00000555052 H3BQ06 376 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF40-205ENST00000555052 GRM6O15303 877 aa17.88■□□□□ 0.45
ARHGEF40-205ENST00000555052 DGKIO75912 1065 aa17.88■□□□□ 0.45
ARHGEF40-205ENST00000555052 SLC26A2P50443 739 aa17.88■□□□□ 0.45
ARHGEF40-205ENST00000555052 PUS10Q3MIT2 529 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-205ENST00000555052 TNPO1Q92973 898 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-205ENST00000555052 FTHL17Q9BXU8 183 aa17.88■□□□□ 0.45
ARHGEF40-205ENST00000555052 LMAN2LQ9H0V9 348 aa17.88■□□□□ 0.45
ARHGEF40-205ENST00000555052 KIAA1671Q9BY89 1806 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 SMIM35A0A1B0GVV1 85 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 POTEB3A0JP26 581 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 FAM86B1E9PN63 330 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 PI4K2BG5E9Z4 385 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 DHX15O43143 795 aaKnown RBP17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 CDC45O75419 566 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 FAM86B2P0C5J1 330 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 TMEM62Q0P6H9 643 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 BTG3Q14201 252 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 PFKFB3Q16875 520 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 POTEBQ6S5H4 581 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 MTHFD1LQ6UB35 978 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 ABHD15Q6UXT9 468 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 GJD3Q8N144 294 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 KCNB2Q92953 911 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 PADI3Q9ULW8 664 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 EVPLQ92817 2033 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 NID2Q14112 1375 aa17.87■□□□□ 0.45
ARHGEF40-205ENST00000555052 IGLV3-22A0A075B6J6 115 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 ESYT2A0FGR8 921 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 M0QZ92 97 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 GPR37L1O60883 481 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 CYP3A4P08684 503 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 HMGB1P09429 215 aaKnown RBP17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 ADD1P35611 737 aaKnown RBP17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 LTBRP36941 435 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 PLA2G5P39877 138 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 CTC1Q2NKJ3 1217 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 TMEM31Q5JXX7 168 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 NPAS4Q8IUM7 802 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 CCDC60Q8IWA6 550 aaPredicted RBP17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 NME8Q8N427 588 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 ATP8B4Q8TF62 1192 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 PLVAPQ9BX97 442 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 CELF4Q9BZC1 486 aaKnown RBP17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 TMX1Q9H3N1 280 aa17.86■□□□□ 0.45
ARHGEF40-205ENST00000555052 ADAMTS3O15072 1205 aa17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 NCK2O43639 380 aa17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 MMP1P03956 469 aa17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 SCG2P13521 617 aa17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 HYAL1Q12794 435 aa17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 PAK2Q13177 524 aa17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 CAMK1Q14012 370 aa17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 JAKMIP3Q5VZ66 844 aa17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 CMTR2Q8IYT2 770 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 MRPL42Q9Y6G3 142 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-205ENST00000555052 MYH9P35579 1960 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 COL1A2P08123 1366 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 ZBTB42B2RXF5 422 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 DDX39AO00148 427 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 HBP1O60381 514 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 CPA1P15085 419 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 KLRC1P26715 233 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 ZNF76P36508 570 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 METAP2P50579 478 aaKnown RBP eCLIP17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 KRT76Q01546 638 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 PKN1Q16512 942 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 FAM160B1Q5W0V3 765 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 PLA2G4DQ86XP0 818 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 KIAA0319LQ8IZA0 1049 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 P2RX5Q93086 422 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 ZMYND12Q9H0C1 365 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 CLDND1Q9NY35 253 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 PLAGL2Q9UPG8 496 aa17.84■□□□□ 0.45
ARHGEF40-205ENST00000555052 ZDBF2Q9HCK1 2354 aa17.83■□□□□ 0.45
ARHGEF40-205ENST00000555052 CCDC196A0A1B0GTZ2 297 aa17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 FAM86C2PA6NEL3 165 aa17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 IPO5O00410 1097 aaKnown RBP17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 BACH1O14867 736 aa17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 ATP4AP20648 1035 aa17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 ZP2Q05996 745 aa17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 APOBRQ0VD83 1088 aa17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 FAM43BQ6ZT52 329 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 FBXL16Q8N461 479 aa17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 ERVK-5Q9HDB9 667 aa17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 ARIH1Q9Y4X5 557 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF40-205ENST00000555052 ZNF318Q5VUA4 2279 aa17.82■□□□□ 0.44
ARHGEF40-205ENST00000555052 MGEA5O60502 916 aa17.82■□□□□ 0.44
ARHGEF40-205ENST00000555052 ITGB1P05556 798 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms