RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TICAM2Q86XR7 235 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 ZGPATQ8N5A5 531 aaKnown RBP7.54□□□□□ -1.2
SCFD1-212ENST00000554486 MAGEB6Q8N7X4 407 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 FAM13CQ8NE31 585 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 OSBP2Q969R2 916 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 NSUN4Q96CB9 384 aaKnown RBP7.54□□□□□ -1.2
SCFD1-212ENST00000554486 FAM227BQ96M60 508 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 IL25Q9H293 177 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 RAI14Q9P0K7 980 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 SUGT1Q9Y2Z0 365 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 MRVI1Q9Y6F6 885 aa7.54□□□□□ -1.2
SCFD1-212ENST00000554486 ZNF532Q9HCE3 1301 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 A0A0D9SFI3 127 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 HIP1O00291 1037 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 ZFYP08048 801 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-212ENST00000554486 IMPDH2P12268 514 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 CYP7A1P22680 504 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 POLR2BP30876 1174 aaKnown RBP7.53□□□□□ -1.2
SCFD1-212ENST00000554486 GP2P55259 537 aaKnown RBP7.53□□□□□ -1.2
SCFD1-212ENST00000554486 EIF6P56537 245 aaKnown RBP7.53□□□□□ -1.2
SCFD1-212ENST00000554486 NMIQ13287 307 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-212ENST00000554486 TNIP1Q15025 636 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 UBE3CQ15386 1083 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 ARSHQ5FYA8 562 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 FBXW10Q5XX13 1052 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 NAA16Q6N069 864 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-212ENST00000554486 ADGRA1Q86SQ6 560 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 APPBP2Q92624 585 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 SEC62Q99442 399 aaKnown RBP7.53□□□□□ -1.2
SCFD1-212ENST00000554486 DUSP23Q9BVJ7 150 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 TANGO6Q9C0B7 1094 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCFD1-212ENST00000554486 DIAPH3Q9NSV4 1193 aa7.53□□□□□ -1.2
SCFD1-212ENST00000554486 ANGEL1Q9UNK9 670 aaKnown RBP7.53□□□□□ -1.2
SCFD1-212ENST00000554486 MAST3O60307 1309 aa7.52□□□□□ -1.2
SCFD1-212ENST00000554486 CDK5RAP2Q96SN8 1893 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 SHTN1A0MZ66 631 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 F8W031 263 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-212ENST00000554486 M0R2C6 588 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 TNFRSF10CO14798 259 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 SGSM2O43147 1006 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 IGSF3O75054 1194 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 EOMESO95936 686 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 NME1P15531 152 aaKnown RBP7.52□□□□□ -1.21
SCFD1-212ENST00000554486 LRRFIP1Q32MZ4 808 aaKnown RBP7.52□□□□□ -1.21
SCFD1-212ENST00000554486 ZSCAN25Q6NSZ9 544 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 TMED8Q6PL24 325 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-212ENST00000554486 CWC27Q6UX04 472 aaKnown RBP7.52□□□□□ -1.21
SCFD1-212ENST00000554486 CCDC129Q6ZRS4 1044 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 ZNF765Q7L2R6 523 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 NLRC3Q7RTR2 1065 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 ZNF589Q86UQ0 364 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-212ENST00000554486 DZIP1Q86YF9 867 aaKnown RBP7.52□□□□□ -1.21
SCFD1-212ENST00000554486 AGBL3Q8NEM8 1001 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 SREK1Q8WXA9 508 aaKnown RBP7.52□□□□□ -1.21
SCFD1-212ENST00000554486 SLC9A7Q96T83 725 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 PUS7LQ9H0K6 701 aaKnown RBP7.52□□□□□ -1.21
SCFD1-212ENST00000554486 ZNF408Q9H9D4 720 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 PRDM10Q9NQV6 1147 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 STRIP2Q9ULQ0 834 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 MROH7-TTC4A0A0A0MT08 1334 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 GAKO14976 1311 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 MYO3BQ8WXR4 1341 aa7.52□□□□□ -1.21
SCFD1-212ENST00000554486 DDNO94850 711 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-212ENST00000554486 UBOX5O94941 541 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 LDHCP07864 332 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 RPS12P25398 132 aaKnown RBP7.51□□□□□ -1.21
SCFD1-212ENST00000554486 GMPSP49915 693 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-212ENST00000554486 GSTO1P78417 241 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 ZYXQ15942 572 aaKnown RBP7.51□□□□□ -1.21
SCFD1-212ENST00000554486 MCMDC2Q4G0Z9 681 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 TOP6BLQ8N6T0 577 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 MFSD2AQ8NA29 543 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 BAHD1Q8TBE0 780 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-212ENST00000554486 RUFY2Q8WXA3 655 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 ANAPC16Q96DE5 110 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 KIF2CQ99661 725 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 RIOK1Q9BRS2 568 aaKnown RBP7.51□□□□□ -1.21
SCFD1-212ENST00000554486 MRIQ9BWK5 157 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 LRRC4CQ9HCJ2 640 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 HELLSQ9NRZ9 838 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 PCDHAC2Q9Y5I4 1007 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 U3KQE9 123 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 CCDC171Q6TFL3 1326 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 RAD50Q92878 1312 aa7.51□□□□□ -1.21
SCFD1-212ENST00000554486 ECM29Q5VYK3 1845 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 GPR75-ASB3A0A0A6YYF3 556 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 RGS13O14921 159 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 FOXP2O15409 715 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 GPAA1O43292 621 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 MBD4O95243 580 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 FAM87AP0C7U9 286 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 YARSP54577 528 aaKnown RBP7.5□□□□□ -1.21
SCFD1-212ENST00000554486 ZNF280AP59817 542 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-212ENST00000554486 DYNLL1P63167 89 aaKnown RBP7.5□□□□□ -1.21
SCFD1-212ENST00000554486 MSMPQ1L6U9 139 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 CFAP100Q494V2 611 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 APOBEC3HQ6NTF7 200 aaKnown RBP7.5□□□□□ -1.21
SCFD1-212ENST00000554486 CASC1Q6TDU7 716 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms