RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CTSHP09668 335 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 IGBP1P78318 339 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 HMGN5P82970 282 aaKnown RBP17.96■□□□□ 0.47
DDX54-204ENST00000546898 LETM2Q2VYF4 491 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 RUFY4Q6ZNE9 571 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 PIK3AP1Q6ZUJ8 805 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 RDM1Q8NG50 284 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 ETNPPLQ8TBG4 499 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 BBXQ8WY36 941 aaPredicted RBP17.96■□□□□ 0.47
DDX54-204ENST00000546898 TTYH1Q9H313 450 aaPredicted RBP17.96■□□□□ 0.47
DDX54-204ENST00000546898 SEMA6BQ9H3T3 888 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 SAMM50Q9Y512 469 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 PCDHA11Q9Y5I1 949 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 PBX2P40425 430 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 WDR5P61964 334 aaKnown RBP17.95■□□□□ 0.46
DDX54-204ENST00000546898 IKBKEQ14164 716 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 PLEKHG4Q58EX7 1191 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 ZNF484Q5JVG2 852 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 KRT40Q6A162 431 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 TNFRSF25Q93038 417 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 FAM167AQ96KS9 214 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 GUCD1Q96NT3 240 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 DISC1Q9NRI5 854 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 GABBR1Q9UBS5 961 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 PCDHA2Q9Y5H9 948 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 MYO9BQ13459 2157 aa17.95■□□□□ 0.46
DDX54-204ENST00000546898 SMIM35A0A1B0GVV1 85 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 SLC37A4O43826 429 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 MGAT3Q09327 533 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 NR5A1Q13285 461 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 B3GNT9Q6UX72 402 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 CKAP2LQ8IYA6 745 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 DIS3L2Q8IYB7 885 aaKnown RBP17.94■□□□□ 0.46
DDX54-204ENST00000546898 DNAJB3Q8WWF6 145 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 SEPT8Q92599 483 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 APBB2Q92870 758 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 FAM161BQ96MY7 647 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 UNC45AQ9H3U1 944 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 KCNMB3Q9NPA1 279 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 CEP131Q9UPN4 1083 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 STXBP5LQ9Y2K9 1186 aa17.94■□□□□ 0.46
DDX54-204ENST00000546898 TBX3O15119 743 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 CHMP2AO43633 222 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 CCNT1O60563 726 aaKnown RBP17.93■□□□□ 0.46
DDX54-204ENST00000546898 ATP4AP20648 1035 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 MRPS6P82932 125 aaKnown RBP17.93■□□□□ 0.46
DDX54-204ENST00000546898 MTHFD1LQ6UB35 978 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 MIER3Q7Z3K6 550 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 HERC6Q8IVU3 1022 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 SLC17A8Q8NDX2 589 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 DBF4BQ8NFT6 615 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 TRAPPC12Q8WVT3 735 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 FAM20AQ96MK3 541 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 TBC1D32Q96NH3 1257 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 ZNF576Q9H609 170 aa17.93■□□□□ 0.46
DDX54-204ENST00000546898 BTBD18B2RXH4 712 aa17.92■□□□□ 0.46
DDX54-204ENST00000546898 KIF28PB7ZC32 967 aa17.92■□□□□ 0.46
DDX54-204ENST00000546898 SAFBQ15424 915 aaKnown RBP eCLIP17.92■□□□□ 0.46
DDX54-204ENST00000546898 TCTN1Q2MV58 587 aa17.92■□□□□ 0.46
DDX54-204ENST00000546898 EARS2Q5JPH6 523 aaKnown RBP17.92■□□□□ 0.46
DDX54-204ENST00000546898 IER5Q5VY09 327 aa17.92■□□□□ 0.46
DDX54-204ENST00000546898 NME8Q8N427 588 aa17.92■□□□□ 0.46
DDX54-204ENST00000546898 C8orf76Q96K31 380 aa17.92■□□□□ 0.46
DDX54-204ENST00000546898 FAM49AQ9H0Q0 323 aaPredicted RBP17.92■□□□□ 0.46
DDX54-204ENST00000546898 NKX2-4Q9H2Z4 354 aa17.92■□□□□ 0.46
DDX54-204ENST00000546898 SLC28A3Q9HAS3 691 aa17.92■□□□□ 0.46
DDX54-204ENST00000546898 YBX2Q9Y2T7 364 aaKnown RBP17.92■□□□□ 0.46
DDX54-204ENST00000546898 SQORQ9Y6N5 450 aa17.92■□□□□ 0.46
DDX54-204ENST00000546898 FAM205CA6NFA0 338 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 ZBTB42B2RXF5 422 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 M0QZ92 97 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 CHRNA1P02708 482 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 OATP04181 439 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 KLRC1P26715 233 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 FOSBP53539 338 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 RABGGTBP53611 331 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 PRKCEQ02156 737 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 PPP2R5CQ13362 524 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 MKRN4PQ13434 485 aaPredicted RBP17.91■□□□□ 0.46
DDX54-204ENST00000546898 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 GJA10Q969M2 543 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 CDX2Q99626 313 aaPredicted RBP17.91■□□□□ 0.46
DDX54-204ENST00000546898 IFIH1Q9BYX4 1025 aaKnown RBP17.91■□□□□ 0.46
DDX54-204ENST00000546898 TRPV2Q9Y5S1 764 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 CDY2AQ9Y6F7 541 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 KDM3AQ9Y4C1 1321 aa17.91■□□□□ 0.46
DDX54-204ENST00000546898 ZNF862O60290 1169 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 MCM2P49736 904 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 DEFB103AP81534 67 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 FBXO47Q5MNV8 452 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 PPP2R2DQ66LE6 453 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 SLFN12Q8IYM2 578 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 USP38Q8NB14 1042 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 ZBTB10Q96DT7 871 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 NRBP2Q9NSY0 501 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 CDH23Q9H251 3354 aa17.9■□□□□ 0.46
DDX54-204ENST00000546898 ARID2Q68CP9 1835 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 MAGEB2O15479 319 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 GJB5O95377 273 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms