RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 IGKV6D-21A0A0A0MT36 114 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 POTEB3A0JP26 581 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 SCG2P13521 617 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 ZNF76P36508 570 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 FGD1P98174 961 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 IER5Q5VY09 327 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 POTEBQ6S5H4 581 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 NIPA1Q7RTP0 329 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 CCDC60Q8IWA6 550 aaPredicted RBP22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 CRYGNQ8WXF5 182 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 KCNB2Q92953 911 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 BRF1Q92994 677 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 ZNF689Q96CS4 500 aaPredicted RBP22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 NSUN3Q9H649 340 aaKnown RBP22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 MYH9P35579 1960 aaKnown RBP22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 WDR81Q562E7 1941 aa22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 IGLV3-22A0A075B6J6 115 aa22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 M0QZ92 97 aa22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 IL9P15248 144 aa22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 MTHFD1LQ6UB35 978 aa22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 Q6ZUG5 572 aa22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 PLA2G4DQ86XP0 818 aa22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 CLP1Q92989 425 aaKnown RBP22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 JAKMIP1Q96N16 626 aaKnown RBP22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 UIMC1Q96RL1 719 aa22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 SQORQ9Y6N5 450 aa22.35■■□□□ 1.17
CACNA1C-230ENST00000543114 SMIM35A0A1B0GVV1 85 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 ESYT2A0FGR8 921 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 H3BQ06 376 aaPredicted RBP22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 DHX15O43143 795 aaKnown RBP22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 DGKIO75912 1065 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 BMPR1AP36894 532 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 SLC26A2P50443 739 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 BTG3Q14201 252 aaPredicted RBP22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 COL19A1Q14993 1142 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 PTCRAQ6ISU1 281 aaPredicted RBP22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 ABHD15Q6UXT9 468 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 RTN4RL1Q86UN2 441 aaPredicted RBP22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 CRIPAKQ8N1N5 446 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 NEK9Q8TD19 979 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 TNPO1Q92973 898 aaKnown RBP22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 C11orf84Q9BUA3 381 aaPredicted RBP22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 PADI3Q9ULW8 664 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 RWDD3Q9Y3V2 267 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 SNX14Q9Y5W7 946 aa22.34■■□□□ 1.17
CACNA1C-230ENST00000543114 KDM3AQ9Y4C1 1321 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 C5orf42Q9H799 3197 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 CCDC196A0A1B0GTZ2 297 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 BACH1O14867 736 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 GRM6O15303 877 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 RB1P06400 928 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 HSPA4P34932 840 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 PAK2Q13177 524 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 PKN1Q16512 942 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 ATP8B4Q8TF62 1192 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 PABPC5Q96DU9 382 aaKnown RBP22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 FTHL17Q9BXU8 183 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 CELF4Q9BZC1 486 aaKnown RBP22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 ZMYND12Q9H0C1 365 aa22.33■■□□□ 1.17
CACNA1C-230ENST00000543114 IPO5O00410 1097 aaKnown RBP22.32■■□□□ 1.16
CACNA1C-230ENST00000543114 CYP3A4P08684 503 aa22.32■■□□□ 1.16
CACNA1C-230ENST00000543114 KLRC1P26715 233 aa22.32■■□□□ 1.16
CACNA1C-230ENST00000543114 FAM160B1Q5W0V3 765 aa22.32■■□□□ 1.16
CACNA1C-230ENST00000543114 BLOC1S2Q6QNY1 142 aa22.32■■□□□ 1.16
CACNA1C-230ENST00000543114 FAM178BQ8IXR5 827 aa22.32■■□□□ 1.16
CACNA1C-230ENST00000543114 REXO1Q8N1G1 1221 aaKnown RBP22.32■■□□□ 1.16
CACNA1C-230ENST00000543114 TMX1Q9H3N1 280 aa22.32■■□□□ 1.16
CACNA1C-230ENST00000543114 MRPL42Q9Y6G3 142 aaKnown RBP22.32■■□□□ 1.16
CACNA1C-230ENST00000543114 FNDC1Q4ZHG4 1894 aaPredicted RBP22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 COL1A2P08123 1366 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 GRXCR2A6NFK2 248 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 HBP1O60381 514 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 PPFIA3O75145 1194 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 CSPG5O95196 566 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 KRT76Q01546 638 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 TMEM266Q2M3C6 531 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 NPAS4Q8IUM7 802 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 PHKBQ93100 1093 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 AGXT2Q9BYV1 514 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 ZNF302Q9NR11 478 aa22.31■■□□□ 1.16
CACNA1C-230ENST00000543114 ZBTB42B2RXF5 422 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 ATP4AP20648 1035 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 RPS6KB1P23443 525 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 SETQ01105 290 aaPredicted RBP22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 MIS18BP1Q6P0N0 1132 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 PDXDC2PQ6P474 469 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 EP400NLQ6ZTU2 488 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 CMTR2Q8IYT2 770 aaKnown RBP22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 RASGRP4Q8TDF6 673 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 CCDC12Q8WUD4 166 aaPredicted RBP22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 ZNF577Q9BSK1 485 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 LMAN2LQ9H0V9 348 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 C6orf50Q9HD87 102 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 C11orf16Q9NQ32 467 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 CLDND1Q9NY35 253 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 GINS2Q9Y248 185 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 PLXNA4Q9HCM2 1894 aa22.3■■□□□ 1.16
CACNA1C-230ENST00000543114 PRPF3O43395 683 aaKnown RBP22.29■■□□□ 1.16
CACNA1C-230ENST00000543114 MMP1P03956 469 aa22.29■■□□□ 1.16
CACNA1C-230ENST00000543114 GATMP50440 423 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms