RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 PUS10Q3MIT2 529 aaKnown RBP17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 SGMS1Q86VZ5 419 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 ADHFE1Q8IWW8 467 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 CDHR5Q9HBB8 845 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 PLAGL2Q9UPG8 496 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 TRPC6Q9Y210 931 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 TRPV2Q9Y5S1 764 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 ZNF318Q5VUA4 2279 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 IGSF9BQ9UPX0 1349 aa17.7■□□□□ 0.42
CLSTN3-213ENST00000541953 APOA5Q6Q788 366 aa17.69■□□□□ 0.42
CLSTN3-213ENST00000541953 RSPH3Q86UC2 560 aa17.69■□□□□ 0.42
CLSTN3-213ENST00000541953 SPPL3Q8TCT6 385 aa17.69■□□□□ 0.42
CLSTN3-213ENST00000541953 TMEM40Q8WWA1 233 aa17.69■□□□□ 0.42
CLSTN3-213ENST00000541953 ANO3Q9BYT9 981 aa17.69■□□□□ 0.42
CLSTN3-213ENST00000541953 LMAN2LQ9H0V9 348 aa17.69■□□□□ 0.42
CLSTN3-213ENST00000541953 AGO4Q9HCK5 861 aaKnown RBP17.69■□□□□ 0.42
CLSTN3-213ENST00000541953 PIEZO1Q92508 2521 aa17.69■□□□□ 0.42
CLSTN3-213ENST00000541953 USP34Q70CQ2 3546 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 DDX39AO00148 427 aaKnown RBP17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 STXBP3O00186 592 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 TECTAO75443 2155 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 GLP2RO95838 553 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 CALM1P0DP23 149 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 CALM2P0DP24 149 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 CALM3P0DP25 149 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 RBM10P98175 930 aaKnown RBP17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 KLHL23Q8NBE8 558 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 RIC8AQ9NPQ8 531 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 ANO2Q9NQ90 1003 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 FAM217BQ9NTX9 383 aaPredicted RBP17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 MUTYHQ9UIF7 546 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 PCDHA2Q9Y5H9 948 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 NFASCO94856 1347 aa17.68■□□□□ 0.42
CLSTN3-213ENST00000541953 EVPLQ92817 2033 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 RRN3P2A6NIE6 340 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 ZBTB42B2RXF5 422 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 ALADP13716 330 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 NAPAP54920 295 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 ADAM15Q13444 863 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 MTHFD1LQ6UB35 978 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 NPAS4Q8IUM7 802 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 CCDC60Q8IWA6 550 aaPredicted RBP17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 CMTR2Q8IYT2 770 aaKnown RBP17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 RASEFQ8IZ41 740 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 TMTC2Q8N394 836 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 MSLNLQ96KJ4 702 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 PPP1R16BQ96T49 567 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 CELF4Q9BZC1 486 aaKnown RBP17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 CLEC1BQ9P126 229 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 PRKAG3Q9UGI9 489 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 RWDD3Q9Y3V2 267 aa17.67■□□□□ 0.42
CLSTN3-213ENST00000541953 IGKV6D-21A0A0A0MT36 114 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 FAM86B1E9PN63 330 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 MAFGO15525 162 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 ATG7O95352 703 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 FAM86B2P0C5J1 330 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 SCG2P13521 617 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 ATP4AP20648 1035 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 CDC27P30260 824 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 CLK2P49760 499 aaKnown RBP17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 STAT5BP51692 787 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 PAK2Q13177 524 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 CEP55Q53EZ4 464 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 IER5Q5VY09 327 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 HFE2Q6ZVN8 426 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 PLVAPQ9BX97 442 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 AZI2Q9H6S1 392 aa17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 NOC2LQ9Y3T9 749 aaKnown RBP17.66■□□□□ 0.42
CLSTN3-213ENST00000541953 SMIM35A0A1B0GVV1 85 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 MEIS1O00470 390 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 SREBF1P36956 1147 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 EXOSC10Q01780 885 aaKnown RBP17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 SMAD4Q13485 552 aaKnown RBP17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 ABHD15Q6UXT9 468 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 PLPPR4Q7Z2D5 763 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 ALYREFQ86V81 257 aaKnown RBP17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 VN1R2Q8NFZ6 395 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 POF1BQ8WVV4 589 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 P2RX5Q93086 422 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 SDF4Q9BRK5 362 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 ERVK-5Q9HDB9 667 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 CD207Q9UJ71 328 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 BARX2Q9UMQ3 279 aaPredicted RBP17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 GINS2Q9Y248 185 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 SQORQ9Y6N5 450 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 V9GY48 417 aaPredicted RBP17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 KDM3AQ9Y4C1 1321 aa17.65■□□□□ 0.42
CLSTN3-213ENST00000541953 WDR81Q562E7 1941 aa17.64■□□□□ 0.42
CLSTN3-213ENST00000541953 IGLV3-22A0A075B6J6 115 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 DHX15O43143 795 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 PPFIA3O75145 1194 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 NRIP1P48552 1158 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 ADCY7P51828 1080 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 KRT76Q01546 638 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 RTN1Q16799 776 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 FAM102BQ5T8I3 360 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 RBM23Q86U06 439 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 RNF135Q8IUD6 432 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms