RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SKOR2Q2VWA4 1001 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-217ENST00000541578 TRIM61Q5EBN2 209 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 PHF19Q5T6S3 580 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 KRT26Q7Z3Y9 468 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 IGDCC4Q8TDY8 1250 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 ZCCHC14Q8WYQ9 949 aaKnown RBP5.66□□□□□ -1.5
SNHG1-217ENST00000541578 MRPL4Q9BYD3 311 aaKnown RBP5.66□□□□□ -1.5
SNHG1-217ENST00000541578 RIC8BQ9NVN3 520 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 ARHGAP20Q9P2F6 1191 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 TCEAL9Q9UHQ7 104 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 ATP23Q9Y6H3 246 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 ZCCHC6Q5VYS8 1495 aaKnown RBP5.65□□□□□ -1.5
SNHG1-217ENST00000541578 FAM90A27PA6NNH2 459 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 ZNF839A8K0R7 811 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 ZNF561-AS1K7EIQ3 104 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 PDGFRBP09619 1106 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 PTPN1P18031 435 aaKnown RBP5.65□□□□□ -1.5
SNHG1-217ENST00000541578 GJA4P35212 333 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 LACTBP83111 547 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-217ENST00000541578 DBPQ10586 325 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-217ENST00000541578 PABPC4Q13310 644 aaKnown RBP eCLIP5.65□□□□□ -1.5
SNHG1-217ENST00000541578 SMAD2Q15796 467 aaKnown RBP5.65□□□□□ -1.5
SNHG1-217ENST00000541578 FIGNQ5HY92 759 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 ODR4Q5SWX8 454 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 JDP2Q8WYK2 163 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 CAAP1Q9H8G2 361 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 BARX1Q9HBU1 254 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-217ENST00000541578 SFMBT1Q9UHJ3 866 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 ZFP69BQ9UJL9 534 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 INVSQ9Y283 1065 aa5.65□□□□□ -1.5
SNHG1-217ENST00000541578 KCNQ2O43526 872 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 PDE8AO60658 829 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 RASGRP1O95267 797 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 NFKB2Q00653 900 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 RPUSD2Q8IZ73 545 aaKnown RBP5.64□□□□□ -1.51
SNHG1-217ENST00000541578 KLHL36Q8N4N3 616 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 STPG3Q8N7X2 389 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 ATL2Q8NHH9 583 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 SCLYQ96I15 445 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 SMURF1Q9HCE7 757 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 CHPF2Q9P2E5 772 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 ARHGAP28Q9P2N2 729 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 CNOT11Q9UKZ1 510 aaKnown RBP5.64□□□□□ -1.51
SNHG1-217ENST00000541578 ATP8A1Q9Y2Q0 1164 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 ZDHHC9Q9Y397 364 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 NCAPD3P42695 1498 aa5.64□□□□□ -1.51
SNHG1-217ENST00000541578 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-217ENST00000541578 ALG1L2C9J202 215 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 K7ESM1 405 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 PLD2O14939 933 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 RAPGEF3O95398 923 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 PLATP00750 562 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 KNG1P01042 644 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 ITGB3P05106 788 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 VIL1P09327 827 aaKnown RBP5.63□□□□□ -1.51
SNHG1-217ENST00000541578 COL6A1P12109 1028 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 NFATC3Q12968 1075 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 SURF1Q15526 300 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 TBC1D10BQ4KMP7 808 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-217ENST00000541578 TM4SF20Q53R12 229 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 CNNM4Q6P4Q7 775 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 BRAPQ7Z569 592 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 PRRT2Q7Z6L0 340 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-217ENST00000541578 PLEKHH3Q7Z736 793 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 CISD2Q8N5K1 135 aaKnown RBP5.63□□□□□ -1.51
SNHG1-217ENST00000541578 NUDT10Q8NFP7 164 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 MBD6Q96DN6 1003 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 NUDT11Q96G61 164 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 CELF4Q9BZC1 486 aaKnown RBP5.63□□□□□ -1.51
SNHG1-217ENST00000541578 NCOA5Q9HCD5 579 aaKnown RBP5.63□□□□□ -1.51
SNHG1-217ENST00000541578 SLC39A2Q9NP94 309 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 COQ6Q9Y2Z9 468 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 ZNF536O15090 1300 aa5.63□□□□□ -1.51
SNHG1-217ENST00000541578 TCRBV16S1A1N1A0A5B0 115 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 KCNK3O14649 394 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 B4GALT3O60512 393 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 CLASP2O75122 1294 aaKnown RBP5.62□□□□□ -1.51
SNHG1-217ENST00000541578 RFPL3O75679 317 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 KLHL18O94889 574 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 PARNO95453 639 aaKnown RBP5.62□□□□□ -1.51
SNHG1-217ENST00000541578 STAT3P40763 770 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 FNDC3BQ53EP0 1204 aaKnown RBP5.62□□□□□ -1.51
SNHG1-217ENST00000541578 PKN3Q6P5Z2 889 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 HHIPL2Q6UWX4 724 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 DPP8Q6V1X1 898 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-217ENST00000541578 Q6ZUG5 572 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 KBTBD2Q8IY47 623 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 AHI1Q8N157 1196 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 TACO1Q9BSH4 297 aaKnown RBP5.62□□□□□ -1.51
SNHG1-217ENST00000541578 KCND1Q9NSA2 647 aa5.62□□□□□ -1.51
SNHG1-217ENST00000541578 PRAMEF25A6NGN4 478 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 H0Y858 1186 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 NPTXRO95502 500 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 IL18BPO95998 194 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 C4BPAP04003 597 aaKnown RBP5.61□□□□□ -1.51
SNHG1-217ENST00000541578 FAM50AQ14320 339 aaKnown RBP5.61□□□□□ -1.51
SNHG1-217ENST00000541578 SPATS1Q496A3 300 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 FGD2Q7Z6J4 655 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 RBM15Q96T37 977 aaKnown RBP eCLIP5.61□□□□□ -1.51
SNHG1-217ENST00000541578 PSMD1Q99460 953 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms