RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 ARHGEF35A5YM69 484 aa19.71■□□□□ 0.75
CLIP1-215ENST00000541108 PRCPP42785 496 aa19.71■□□□□ 0.75
CLIP1-215ENST00000541108 RARRES1P49788 294 aa19.71■□□□□ 0.75
CLIP1-215ENST00000541108 STK4Q13043 487 aa19.71■□□□□ 0.75
CLIP1-215ENST00000541108 UGCGQ16739 394 aa19.71■□□□□ 0.75
CLIP1-215ENST00000541108 CCDC60Q8IWA6 550 aaPredicted RBP19.71■□□□□ 0.75
CLIP1-215ENST00000541108 DHX37Q8IY37 1157 aaKnown RBP19.71■□□□□ 0.75
CLIP1-215ENST00000541108 SMYD4Q8IYR2 804 aaPredicted RBP19.71■□□□□ 0.75
CLIP1-215ENST00000541108 ADSSL1Q8N142 457 aa19.71■□□□□ 0.75
CLIP1-215ENST00000541108 PDGFCQ9NRA1 345 aa19.71■□□□□ 0.75
CLIP1-215ENST00000541108 ODF2LQ9ULJ1 636 aa19.71■□□□□ 0.75
CLIP1-215ENST00000541108 GDAQ9Y2T3 454 aa19.71■□□□□ 0.75
CLIP1-215ENST00000541108 IGSF9BQ9UPX0 1349 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 GSTTP1A0A1W2PQM5 241 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 GUCY2CP25092 1073 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 SP4Q02446 784 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 COASYQ13057 564 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 OLFML2BQ68BL8 750 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 AFAP1L1Q8TED9 768 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 DHTKD1Q96HY7 919 aaPredicted RBP19.7■□□□□ 0.74
CLIP1-215ENST00000541108 REEP2Q9BRK0 252 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 RUSC1Q9BVN2 902 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 ZNF302Q9NR11 478 aa19.7■□□□□ 0.74
CLIP1-215ENST00000541108 BACH1O14867 736 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 FCGRTP55899 365 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 LACTBP83111 547 aaPredicted RBP19.69■□□□□ 0.74
CLIP1-215ENST00000541108 ACVR2BQ13705 512 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 LAMC2Q13753 1193 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 PADI6Q6TGC4 694 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 ANO5Q75V66 913 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 EMID1Q96A84 441 aaPredicted RBP19.69■□□□□ 0.74
CLIP1-215ENST00000541108 APBA2Q99767 749 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 TIPINQ9BVW5 301 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 RWDD2AQ9UIY3 292 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 COL4A3BPQ9Y5P4 624 aa19.69■□□□□ 0.74
CLIP1-215ENST00000541108 MYH9P35579 1960 aaKnown RBP19.69■□□□□ 0.74
CLIP1-215ENST00000541108 NPHP3-ACAD11A0A0J9YXS1 232 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 PSMA7O14818 248 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 ZNF862O60290 1169 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 STBD1O95210 358 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 GAP43P17677 238 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 PAK1Q13153 545 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 XKR3Q5GH77 459 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 HERC4Q5GLZ8 1057 aaPredicted RBP19.68■□□□□ 0.74
CLIP1-215ENST00000541108 FAM160B1Q5W0V3 765 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 IQSEC1Q6DN90 963 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 KIAA0895Q8NCT3 520 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 CCDC43Q96MW1 224 aaKnown RBP19.68■□□□□ 0.74
CLIP1-215ENST00000541108 GPR20Q99678 358 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 TELO2Q9Y4R8 837 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 MGAMO43451 1857 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 NOP56O00567 594 aaKnown RBP19.68■□□□□ 0.74
CLIP1-215ENST00000541108 NKRFO15226 690 aaKnown RBP eCLIP19.68■□□□□ 0.74
CLIP1-215ENST00000541108 TBCAO75347 108 aaKnown RBP19.68■□□□□ 0.74
CLIP1-215ENST00000541108 IGHA2P01877 340 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 XRCC5P13010 732 aaKnown RBP19.68■□□□□ 0.74
CLIP1-215ENST00000541108 TCF7P36402 384 aaPredicted RBP19.68■□□□□ 0.74
CLIP1-215ENST00000541108 HSDL1Q3SXM5 330 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 FAM26FQ5R3K3 315 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 SPATA1Q5VX52 437 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 KLHL10Q6JEL2 608 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 GUF1Q8N442 669 aaKnown RBP19.68■□□□□ 0.74
CLIP1-215ENST00000541108 SPATA33Q96N06 139 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 MED15Q96RN5 788 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 SLC39A2Q9NP94 309 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 PCDHA2Q9Y5H9 948 aa19.68■□□□□ 0.74
CLIP1-215ENST00000541108 SORBS3O60504 671 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 KIF20AO95235 890 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 GH1P01241 217 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 CTGFP29279 349 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 PSMC4P43686 418 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 STAT5BP51692 787 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 ZNF131P52739 623 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 RAD51AP2Q09MP3 1159 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 DUSP28Q4G0W2 176 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 XKR9Q5GH70 373 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 SARM1Q6SZW1 724 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 AZI2Q9H6S1 392 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 OLFML3Q9NRN5 406 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 SEL1LQ9UBV2 794 aa19.67■□□□□ 0.74
CLIP1-215ENST00000541108 LGR5O75473 907 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 CYP2B6P20813 491 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 VEGFBP49765 207 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 SLC26A2P50443 739 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 PRKCEQ02156 737 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 SP3Q02447 781 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 ARHGAP1Q07960 439 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 UTP14CQ5TAP6 766 aaKnown RBP19.66■□□□□ 0.74
CLIP1-215ENST00000541108 FOXR2Q6PJQ5 311 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 PLPPR4Q7Z2D5 763 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 NELFBQ8WX92 580 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 PCYT2Q99447 389 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 HSD3B7Q9H2F3 369 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 PARVGQ9HBI0 331 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 MAPK8IP1Q9UQF2 711 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 NFE2L3Q9Y4A8 694 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 SYNRGQ9UMZ2 1314 aa19.66■□□□□ 0.74
CLIP1-215ENST00000541108 BICDL2A1A5D9 508 aa19.65■□□□□ 0.74
CLIP1-215ENST00000541108 FAM13AO94988 1023 aa19.65■□□□□ 0.74
CLIP1-215ENST00000541108 ADCYAP1R1P41586 468 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms