RNA–Protein interactions for RNA: ENST00000539743.5

CPT1A-205, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CPT1A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-205ENST00000539743 UTP11Q9Y3A2 253 aaKnown RBP13.59□□□□□ -0.23
CPT1A-205ENST00000539743 TJP1Q07157 1748 aa13.59□□□□□ -0.23
CPT1A-205ENST00000539743 RGS16O15492 202 aaPredicted RBP13.58□□□□□ -0.24
CPT1A-205ENST00000539743 PENKP01210 267 aaPredicted RBP13.58□□□□□ -0.24
CPT1A-205ENST00000539743 RFC5P40937 340 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 USP11P51784 963 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 SF3A3Q12874 501 aaKnown RBP eCLIP13.58□□□□□ -0.249e-8■■■■■ 48.2
CPT1A-205ENST00000539743 SCARF1Q14162 830 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 UBE3CQ15386 1083 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 TDRD12Q587J7 1177 aaKnown RBP13.58□□□□□ -0.24
CPT1A-205ENST00000539743 C6orf118Q5T5N4 469 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 RNF220Q5VTB9 566 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 CMTR1Q8N1G2 835 aaKnown RBP13.58□□□□□ -0.24
CPT1A-205ENST00000539743 ASAP3Q8TDY4 903 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 PIGOQ8TEQ8 1089 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 ANKS1AQ92625 1134 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 OPTNQ96CV9 577 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.58□□□□□ -0.242e-6■■■□□ 18.1
CPT1A-205ENST00000539743 MTFR1LQ9H019 292 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 ZCWPW1Q9H0M4 648 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 ATP8A1Q9Y2Q0 1164 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 THRAP3Q9Y2W1 955 aaKnown RBP13.58□□□□□ -0.24
CPT1A-205ENST00000539743 CD2APQ9Y5K6 639 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 BTNL10A8MVZ5 291 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 PEX11AO75192 247 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 UNC5CO95185 931 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 SERPING1P05155 500 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 ITGA6P23229 1130 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 CCDC15Q0P6D6 951 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 IL17AQ16552 155 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 DPY19L2Q6NUT2 758 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 TMC4Q7Z404 712 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 NEK9Q8TD19 979 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 UBE2OQ9C0C9 1292 aaKnown RBP13.58□□□□□ -0.24
CPT1A-205ENST00000539743 PABPC3Q9H361 631 aaKnown RBP13.58□□□□□ -0.24
CPT1A-205ENST00000539743 LRRC4CQ9HCJ2 640 aa13.58□□□□□ -0.24
CPT1A-205ENST00000539743 CEP104O60308 925 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ATP5HO75947 161 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 SFSWAPQ12872 951 aaKnown RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 PKN1Q16512 942 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 MAN2A1Q16706 1144 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 PABPC1LQ4VXU2 614 aaKnown RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 AKNAD1Q5T1N1 836 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 DENND2CQ68D51 928 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 TAOK1Q7L7X3 1001 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ZNF654Q8IZM8 581 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 RBBP8NLQ8NC74 664 aaPredicted RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 FAM136AQ96C01 138 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 DDX47Q9H0S4 455 aaKnown RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 TXLNGQ9NUQ3 528 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 KBTBD4Q9NVX7 518 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ATXN10Q9UBB4 475 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 GGT7Q9UJ14 662 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ZMYND8Q9ULU4 1186 aaPredicted RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 NHSL1Q5SYE7 1610 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 KRIT1O00522 736 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 PRPF3O43395 683 aaKnown RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 TPP2P29144 1249 aaPredicted RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ADORA1P30542 326 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 CNGA2Q16280 664 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ACBD5Q5T8D3 534 aaPredicted RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 LCA5Q86VQ0 697 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 AGGF1Q8N302 714 aaeCLIP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ARHGAP18Q8N392 663 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 FITM2Q8N6M3 262 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ZNF526Q8TF50 670 aaPredicted RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ISCA1Q9BUE6 129 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 ZMYND12Q9H0C1 365 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 VCX3BQ9H321 246 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 VCX3AQ9NNX9 186 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 DNAAF2Q9NVR5 837 aaKnown RBP13.57□□□□□ -0.24
CPT1A-205ENST00000539743 PNMA3Q9UL41 463 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 TMCO1Q9UM00 188 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 LRCH1Q9Y2L9 728 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 AKAP11Q9UKA4 1901 aa13.57□□□□□ -0.24
CPT1A-205ENST00000539743 RXRBP28702 533 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 ABCD1P33897 745 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 IFNAR2P48551 515 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 MYBPC3Q14896 1274 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 SLC18A3Q16572 532 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 COBLL1Q53SF7 1204 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 NAALADL2Q58DX5 795 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 BTNL9Q6UXG8 535 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 MFSD6Q6ZSS7 791 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 EEF2KMTQ96G04 330 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 TMEM109Q9BVC6 243 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 AP1M1Q9BXS5 423 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 ETNK1Q9HBU6 452 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 PRKAG3Q9UGI9 489 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 AMACRQ9UHK6 382 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 CNOT7Q9UIV1 285 aaKnown RBP13.56□□□□□ -0.24
CPT1A-205ENST00000539743 RPL26L1Q9UNX3 145 aaKnown RBP13.56□□□□□ -0.24
CPT1A-205ENST00000539743 NOC2LQ9Y3T9 749 aaKnown RBP13.56□□□□□ -0.24
CPT1A-205ENST00000539743 TOGARAM1Q9Y4F4 1720 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 LMNAP02545 664 aaKnown RBP13.56□□□□□ -0.24
CPT1A-205ENST00000539743 RNF43Q68DV7 783 aa13.56□□□□□ -0.24
CPT1A-205ENST00000539743 TIPINQ9BVW5 301 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms