RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 Q6ZUG5 572 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 PLA2G4DQ86XP0 818 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 REXO1Q8N1G1 1221 aaKnown RBP11.02□□□□□ -0.65
CHD4-207ENST00000537634 BRF1Q92994 677 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 JAKMIP1Q96N16 626 aaKnown RBP11.02□□□□□ -0.65
CHD4-207ENST00000537634 C11orf84Q9BUA3 381 aaPredicted RBP11.02□□□□□ -0.65
CHD4-207ENST00000537634 FTHL17Q9BXU8 183 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 NSUN3Q9H649 340 aaKnown RBP11.02□□□□□ -0.65
CHD4-207ENST00000537634 AGO3Q9H9G7 860 aaKnown RBP11.02□□□□□ -0.65
CHD4-207ENST00000537634 TCEAL9Q9UHQ7 104 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 SQORQ9Y6N5 450 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 IGSF9BQ9UPX0 1349 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 SMIM35A0A1B0GVV1 85 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 ESYT2A0FGR8 921 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 FAM86B1E9PN63 330 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 C5orf67F2Z3F1 127 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 IPO5O00410 1097 aaKnown RBP11.01□□□□□ -0.65
CHD4-207ENST00000537634 HBP1O60381 514 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 ATG7O95352 703 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 CCNE2O96020 404 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 RB1P06400 928 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 FAM86B2P0C5J1 330 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 ADD1P35611 737 aaKnown RBP11.01□□□□□ -0.65
CHD4-207ENST00000537634 BMPR1AP36894 532 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 SETQ01105 290 aaPredicted RBP11.01□□□□□ -0.65
CHD4-207ENST00000537634 AKAP17AQ02040 695 aaKnown RBP11.01□□□□□ -0.65
CHD4-207ENST00000537634 TCEAL5Q5H9L2 206 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 MIS18BP1Q6P0N0 1132 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 PDXDC2PQ6P474 469 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 MTHFD1LQ6UB35 978 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 EP400NLQ6ZTU2 488 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 NME8Q8N427 588 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 ATP8B4Q8TF62 1192 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 CELF4Q9BZC1 486 aaKnown RBP11.01□□□□□ -0.65
CHD4-207ENST00000537634 ZMYND12Q9H0C1 365 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 LMAN2LQ9H0V9 348 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 RC3H2Q9HBD1 1191 aaKnown RBP11.01□□□□□ -0.65
CHD4-207ENST00000537634 C6orf50Q9HD87 102 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 ZNF302Q9NR11 478 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 ATG2AQ2TAZ0 1938 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 COL1A2P08123 1366 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 NID2Q14112 1375 aa11.01□□□□□ -0.65
CHD4-207ENST00000537634 KIAA1671Q9BY89 1806 aa11□□□□□ -0.65
CHD4-207ENST00000537634 MYH9P35579 1960 aaKnown RBP11□□□□□ -0.65
CHD4-207ENST00000537634 IGLV3-22A0A075B6J6 115 aa11□□□□□ -0.65
CHD4-207ENST00000537634 IGKV6D-21A0A0A0MT36 114 aa11□□□□□ -0.65
CHD4-207ENST00000537634 DGKIO75912 1065 aa11□□□□□ -0.65
CHD4-207ENST00000537634 REC8O95072 547 aa11□□□□□ -0.65
CHD4-207ENST00000537634 CYP3A4P08684 503 aa11□□□□□ -0.65
CHD4-207ENST00000537634 STAG3L1P0CL83 205 aa11□□□□□ -0.65
CHD4-207ENST00000537634 GNA11P29992 359 aa11□□□□□ -0.65
CHD4-207ENST00000537634 HSPA4P34932 840 aa11□□□□□ -0.65
CHD4-207ENST00000537634 KRT76Q01546 638 aa11□□□□□ -0.65
CHD4-207ENST00000537634 PUS10Q3MIT2 529 aaKnown RBP11□□□□□ -0.65
CHD4-207ENST00000537634 PTCRAQ6ISU1 281 aaPredicted RBP11□□□□□ -0.65
CHD4-207ENST00000537634 ABHD15Q6UXT9 468 aa11□□□□□ -0.65
CHD4-207ENST00000537634 NPAS4Q8IUM7 802 aa11□□□□□ -0.65
CHD4-207ENST00000537634 CCDC60Q8IWA6 550 aaPredicted RBP11□□□□□ -0.65
CHD4-207ENST00000537634 CKAP2LQ8IYA6 745 aa11□□□□□ -0.65
CHD4-207ENST00000537634 CMTR2Q8IYT2 770 aaKnown RBP11□□□□□ -0.65
CHD4-207ENST00000537634 CCDC148Q8NFR7 591 aa11□□□□□ -0.65
CHD4-207ENST00000537634 GADD45GIP1Q8TAE8 222 aaPredicted RBP11□□□□□ -0.65
CHD4-207ENST00000537634 LINC01599Q8WXQ3 324 aa11□□□□□ -0.65
CHD4-207ENST00000537634 KCNB2Q92953 911 aa11□□□□□ -0.65
CHD4-207ENST00000537634 CLP1Q92989 425 aaKnown RBP11□□□□□ -0.65
CHD4-207ENST00000537634 ZNF689Q96CS4 500 aaPredicted RBP11□□□□□ -0.65
CHD4-207ENST00000537634 PABPC5Q96DU9 382 aaKnown RBP11□□□□□ -0.65
CHD4-207ENST00000537634 ZNF577Q9BSK1 485 aa11□□□□□ -0.65
CHD4-207ENST00000537634 TBC1D22BQ9NU19 505 aa11□□□□□ -0.65
CHD4-207ENST00000537634 PADI3Q9ULW8 664 aa11□□□□□ -0.65
CHD4-207ENST00000537634 GINS2Q9Y248 185 aa11□□□□□ -0.65
CHD4-207ENST00000537634 SNX14Q9Y5W7 946 aa11□□□□□ -0.65
CHD4-207ENST00000537634 KDM3AQ9Y4C1 1321 aa11□□□□□ -0.65
CHD4-207ENST00000537634 H3BQ06 376 aaPredicted RBP10.99□□□□□ -0.65
CHD4-207ENST00000537634 GRM6O15303 877 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 PRPF3O43395 683 aaKnown RBP10.99□□□□□ -0.65
CHD4-207ENST00000537634 NCK2O43639 380 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 CSPG5O95196 566 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 LINC00271P0C7V0 271 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 RPS6KB1P23443 525 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 KLRC1P26715 233 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 PSMA5P28066 241 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 SSTR3P32745 418 aaPredicted RBP10.99□□□□□ -0.65
CHD4-207ENST00000537634 ZNF484Q5JVG2 852 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 ZNF746Q6NUN9 644 aaPredicted RBP10.99□□□□□ -0.65
CHD4-207ENST00000537634 SWSAP1Q6NVH7 229 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 BICD2Q8TD16 824 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 NEK9Q8TD19 979 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 CRYGNQ8WXF5 182 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 PHKBQ93100 1093 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 CCDC136Q96JN2 1154 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 UIMC1Q96RL1 719 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 CLDND1Q9NY35 253 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 RAPGEFL1Q9UHV5 662 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 LRFN2Q9ULH4 789 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 FAM50BQ9Y247 325 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms