RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SF3A3Q12874 501 aaKnown RBP eCLIP11.8□□□□□ -0.526e-9■■■■■ 32.1
CLSTN3-207ENST00000537408 KCNJ12Q14500 433 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 ERMARDQ5T6L9 678 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 NFRKBQ6P4R8 1299 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 OLFML1Q6UWY5 402 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 KIF2BQ8N4N8 673 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 HAUS1Q96CS2 278 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 STMN4Q9H169 189 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 TXLNGQ9NUQ3 528 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 UTP6Q9NYH9 597 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 LRCH1Q9Y2L9 728 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 KLF18A0A0U1RQI7 1052 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 ZFYP08048 801 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 GALNT17Q6IS24 598 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 TAF4BQ92750 862 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 KRT12Q99456 494 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 INTS9Q9NV88 658 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 STOML1Q9UBI4 398 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 PALM3A6NDB9 673 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 NTSR2O95665 410 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 HAND2P61296 217 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 DNAJC7Q99615 494 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 IFIH1Q9BYX4 1025 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 VPS33BQ9H267 617 aa11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 NHEJ1Q9H9Q4 299 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-207ENST00000537408 NVLO15381 856 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 GLI1P08151 1106 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 KRT16P08779 473 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 CASKIN2Q8WXE0 1202 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 ABTB1Q969K4 478 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 OLFM3Q96PB7 478 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 COMMD3-BMI1R4GMX3 469 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 ECE2O60344 883 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 RPS12P25398 132 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 CXCR5P32302 372 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 CACNA2D1P54289 1103 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 ZNF844Q08AG5 666 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 RCN2Q14257 317 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 PABPC1LQ4VXU2 614 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 RRAGBQ5VZM2 374 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 APTXQ7Z2E3 356 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 STK32AQ8WU08 396 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 NUDCD1Q96RS6 583 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 ARHGEF10LQ9HCE6 1279 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 USH1CQ9Y6N9 552 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 TTC26A0AVF1 554 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 TROVE2P10155 538 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 RARAP10276 462 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 TUBP50607 506 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 EXOSC10Q01780 885 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 MAP7D1Q3KQU3 841 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 SLC44A4Q53GD3 710 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 CROCCP2Q86T23 111 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 CCDC65Q8IXS2 484 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 EIF1ADQ8N9N8 165 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 NOX5Q96PH1 765 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 LRWD1Q9UFC0 647 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 INTUQ9ULD6 942 aa11.79□□□□□ -0.52
CLSTN3-207ENST00000537408 GRID2IPA4D2P6 1211 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 AFMP43652 599 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 LRRC34Q8IZ02 419 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 RBBP8NLQ8NC74 664 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 AGXT2Q9BYV1 514 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 TFR2Q9UP52 801 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 SH3GLB1Q9Y371 365 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 USP15Q9Y4E8 981 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 EPHX2P34913 555 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 PRKG1Q13976 671 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 PTPAQ15257 358 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 SLC10A5Q5PT55 438 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 PIGWQ7Z7B1 504 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 OR2W6PQ8NHA6 318 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 CTNNBL1Q8WYA6 563 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 CELF1Q92879 486 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 PTPRN2Q92932 1015 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.78□□□□□ -0.527e-7■■■□□ 16.1
CLSTN3-207ENST00000537408 ABCF3Q9NUQ8 709 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 CAPN11Q9UMQ6 739 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 AGAP1Q9UPQ3 857 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 JAG2Q9Y219 1238 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 MOCS3O95396 460 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 CYP7A1P22680 504 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 USP46P62068 366 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 PAK1Q13153 545 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 KRT26Q7Z3Y9 468 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 GRAMD1CQ8IYS0 662 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 PIGOQ8TEQ8 1089 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 CLMNQ96JQ2 1002 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 GSDMAQ96QA5 445 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 LACRTQ9GZZ8 138 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 ARHGEF3Q9NR81 526 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 RGPD1P0DJD0 1748 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 CRYBG1Q9Y4K1 1723 aa11.78□□□□□ -0.52
CLSTN3-207ENST00000537408 hCG_2014768A0A024R1R8 64 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms