RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 GALNT17Q6IS24 598 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 ZNF746Q6NUN9 644 aaPredicted RBP18.57■□□□□ 0.56
ATL3-202ENST00000535789 B3GNT9Q6UX72 402 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.57■□□□□ 0.564e-6■■■■□ 20.5
ATL3-202ENST00000535789 RPAINQ86UA6 219 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 HERC6Q8IVU3 1022 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 DNAJB3Q8WWF6 145 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 AZI2Q9H6S1 392 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 UPF2Q9HAU5 1272 aaKnown RBP18.57■□□□□ 0.56
ATL3-202ENST00000535789 TBC1D22BQ9NU19 505 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 TRPC6Q9Y210 931 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 PCDHA11Q9Y5I1 949 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 FNDC1Q4ZHG4 1894 aaPredicted RBP18.56■□□□□ 0.56
ATL3-202ENST00000535789 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 PSMD10O75832 226 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 KRT76Q01546 638 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 NR5A1Q13285 461 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 NONOQ15233 471 aaKnown RBP eCLIP18.56■□□□□ 0.56
ATL3-202ENST00000535789 SWSAP1Q6NVH7 229 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 ATP8B4Q8TF62 1192 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 C22orf23Q9BZE7 217 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 UNC45AQ9H3U1 944 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 ZNF302Q9NR11 478 aa18.56■□□□□ 0.56
ATL3-202ENST00000535789 MAFBQ9Y5Q3 323 aaPredicted RBP18.56■□□□□ 0.56
ATL3-202ENST00000535789 LCHNA4D1U4 455 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 WNT7AO00755 349 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 BACH1O14867 736 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 ZNF862O60290 1169 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 CA3P07451 260 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 FOSBP53539 338 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 MIS18BP1Q6P0N0 1132 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 TAF2Q6P1X5 1199 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 MOXD1Q6UVY6 613 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 KRT25Q7Z3Z0 450 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 SMAP1Q8IYB5 467 aaPredicted RBP18.55■□□□□ 0.56
ATL3-202ENST00000535789 PHOSPHO2Q8TCD6 241 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 MSRAQ9UJ68 235 aa18.55■□□□□ 0.56
ATL3-202ENST00000535789 PRRC2BQ5JSZ5 2229 aaKnown RBP18.55■□□□□ 0.56
ATL3-202ENST00000535789 ABHD14A-ACY1A0A1B0GW23 586 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.54■□□□□ 0.56
ATL3-202ENST00000535789 EPOPA6NHQ4 379 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 CHMP2AO43633 222 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 ADGRE1Q14246 886 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 LPIN1Q14693 890 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 PDXDC2PQ6P474 469 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 MTHFD1LQ6UB35 978 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 PIK3AP1Q6ZUJ8 805 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 CCDC83Q8IWF9 413 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 RIT2Q99578 217 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 FAM49AQ9H0Q0 323 aaPredicted RBP18.54■□□□□ 0.56
ATL3-202ENST00000535789 PRDM12Q9H4Q4 367 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 GABBR1Q9UBS5 961 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 CDY2AQ9Y6F7 541 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 COL1A2P08123 1366 aa18.54■□□□□ 0.56
ATL3-202ENST00000535789 RRN3P2A6NIE6 340 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 GHRP10912 638 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 SLC26A2P50443 739 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 TMEM62Q0P6H9 643 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 LETM2Q2VYF4 491 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 LRCH2Q5VUJ6 765 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 FAM160B1Q5W0V3 765 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 PPP2R2DQ66LE6 453 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 KCNMB3Q9NPA1 279 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 LIMCH1Q9UPQ0 1083 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 PCDHA2Q9Y5H9 948 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 PCDHA10Q9Y5I2 948 aa18.53■□□□□ 0.56
ATL3-202ENST00000535789 CCDC194A0A1B0GVG4 234 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 WDR64B1ANS9 1081 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 HBP1O60381 514 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 GAS7O60861 476 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 GJB5O95377 273 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 CD2BP2O95400 341 aaKnown RBP18.52■□□□□ 0.56
ATL3-202ENST00000535789 C22orf31O95567 290 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 MMP1P03956 469 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 FOSL2P15408 326 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 KCNJ6P48051 423 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 MRPS6P82932 125 aaKnown RBP18.52■□□□□ 0.56
ATL3-202ENST00000535789 TAP1Q03518 808 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 FBXO47Q5MNV8 452 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 NEK8Q86SG6 692 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 USP38Q8NB14 1042 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 LINC01599Q8WXQ3 324 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 HAS1Q92839 578 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 TEKT3Q9BXF9 490 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 AGO3Q9H9G7 860 aaKnown RBP18.52■□□□□ 0.56
ATL3-202ENST00000535789 SLC28A3Q9HAS3 691 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 DISC1Q9NRI5 854 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 DDX25Q9UHL0 483 aaKnown RBP18.52■□□□□ 0.56
ATL3-202ENST00000535789 VAV3Q9UKW4 847 aa18.52■□□□□ 0.56
ATL3-202ENST00000535789 SMIM35A0A1B0GVV1 85 aa18.51■□□□□ 0.55
ATL3-202ENST00000535789 STBD1O95210 358 aa18.51■□□□□ 0.55
ATL3-202ENST00000535789 PSAPP07602 524 aa18.51■□□□□ 0.55
ATL3-202ENST00000535789 KLRC1P26715 233 aa18.51■□□□□ 0.55
ATL3-202ENST00000535789 KRT2P35908 639 aa18.51■□□□□ 0.55
ATL3-202ENST00000535789 IKBKEQ14164 716 aa18.51■□□□□ 0.55
ATL3-202ENST00000535789 KRT40Q6A162 431 aa18.51■□□□□ 0.55
ATL3-202ENST00000535789 TRMT1LQ7Z2T5 733 aaKnown RBP18.51■□□□□ 0.55
ATL3-202ENST00000535789 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
ATL3-202ENST00000535789 LINC01465Q8N7H1 131 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms