RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 NCAPH2Q6IBW4 605 aa13.14□□□□□ -0.31
ACER3-210ENST00000531352 VWCEQ96DN2 955 aa13.14□□□□□ -0.31
ACER3-210ENST00000531352 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
ACER3-210ENST00000531352 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
ACER3-210ENST00000531352 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
ACER3-210ENST00000531352 NOD1Q9Y239 953 aa13.14□□□□□ -0.31
ACER3-210ENST00000531352 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 STBD1O95210 358 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 BAG4O95429 457 aaKnown RBP13.13□□□□□ -0.31
ACER3-210ENST00000531352 OR52Z1P0C646 297 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 TECP42680 631 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 EPHB4P54760 987 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 CEBPZQ03701 1054 aaKnown RBP13.13□□□□□ -0.31
ACER3-210ENST00000531352 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
ACER3-210ENST00000531352 FAM160B1Q5W0V3 765 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 SERINC5Q86VE9 423 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 ATP8B4Q8TF62 1192 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 SCLYQ96I15 445 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 PRO3102Q9H379 93 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
ACER3-210ENST00000531352 CLIC4Q9Y696 253 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
ACER3-210ENST00000531352 SLC26A2P50443 739 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 GRIN1Q05586 938 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 RUFY4Q6ZNE9 571 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 CKAP2LQ8IYA6 745 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 RDM1Q8NG50 284 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
ACER3-210ENST00000531352 CHD7Q9P2D1 2997 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 ZBTB39O15060 712 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 SLITRK3O94933 977 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 CSF2RAP15509 400 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 PRKCEQ02156 737 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 CYP4A11Q02928 519 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 ORC2Q13416 577 aaPredicted RBP13.12□□□□□ -0.31
ACER3-210ENST00000531352 GPNMBQ14956 572 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 MFSD5Q6N075 450 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 TRAF7Q6Q0C0 670 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 DYDC2Q96IM9 177 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 OSBPL7Q9BZF2 842 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
ACER3-210ENST00000531352 CHD9Q3L8U1 2897 aa13.12□□□□□ -0.31
ACER3-210ENST00000531352 MBLAC1A4D2B0 266 aaPredicted RBP13.11□□□□□ -0.31
ACER3-210ENST00000531352 PP2D1A8MPX8 630 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 HBP1O60381 514 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 CKBP12277 381 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 CDC25AP30304 524 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 PTK7Q13308 1070 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 CTTNQ14247 550 aaKnown RBP13.11□□□□□ -0.31
ACER3-210ENST00000531352 EPHA7Q15375 998 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 C16orf59Q7L2K0 433 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 BRAPQ7Z569 592 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 HSD17B14Q9BPX1 270 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 EIF2AK1Q9BQI3 630 aaKnown RBP13.11□□□□□ -0.31
ACER3-210ENST00000531352 TUBE1Q9UJT0 475 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 OATP04181 439 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 IQCF3P0C7M6 154 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 ZSCAN22P10073 491 aaPredicted RBP13.11□□□□□ -0.31
ACER3-210ENST00000531352 KLRC1P26715 233 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 DDIT3P35638 169 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
ACER3-210ENST00000531352 BECN1Q14457 450 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 ZNF618Q5T7W0 954 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 ANO5Q75V66 913 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
ACER3-210ENST00000531352 BBXQ8WY36 941 aaPredicted RBP13.11□□□□□ -0.31
ACER3-210ENST00000531352 USP28Q96RU2 1077 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
ACER3-210ENST00000531352 LXNQ9BS40 222 aa13.11□□□□□ -0.31
ACER3-210ENST00000531352 TFIP11Q9UBB9 837 aaKnown RBP13.11□□□□□ -0.31
ACER3-210ENST00000531352 TANC1Q9C0D5 1861 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 MYH15Q9Y2K3 1946 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 P4HBP07237 508 aaKnown RBP13.1□□□□□ -0.31
ACER3-210ENST00000531352 SPATA31C1P0DKV0 1188 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 ACRP10323 421 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 GNAT1P11488 350 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 PSMC5P62195 406 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
ACER3-210ENST00000531352 MBTPS1Q14703 1052 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 SF3A1Q15459 793 aaKnown RBP13.1□□□□□ -0.31
ACER3-210ENST00000531352 MTHFD1LQ6UB35 978 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 DNAJB3Q8WWF6 145 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 SIP14410 1827 aa13.1□□□□□ -0.31
ACER3-210ENST00000531352 RRN3P2A6NIE6 340 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 F13A1P00488 732 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 THPOP40225 353 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
ACER3-210ENST00000531352 RBL2Q08999 1139 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 TARBP2Q15633 366 aaKnown RBP13.09□□□□□ -0.31
ACER3-210ENST00000531352 PLA2G4FQ68DD2 849 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 TPH2Q8IWU9 490 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 EYSQ5T1H1 3165 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 MED24O75448 989 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 BRD1O95696 1058 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 CTSHP09668 335 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 NPEPPSP55786 919 aa13.09□□□□□ -0.31
ACER3-210ENST00000531352 FPGSQ05932 587 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms