RNA–Protein interactions for RNA: ENST00000531257.1

FOXRED1-211, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-211ENST00000531257 TRMT1LQ7Z2T5 733 aaKnown RBP12.99□□□□□ -0.33
FOXRED1-211ENST00000531257 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
FOXRED1-211ENST00000531257 RAPGEFL1Q9UHV5 662 aa12.99□□□□□ -0.33
FOXRED1-211ENST00000531257 GINS2Q9Y248 185 aa12.99□□□□□ -0.33
FOXRED1-211ENST00000531257 PCDHA2Q9Y5H9 948 aa12.99□□□□□ -0.33
FOXRED1-211ENST00000531257 SNX14Q9Y5W7 946 aa12.99□□□□□ -0.33
FOXRED1-211ENST00000531257 TTC28Q96AY4 2481 aa12.99□□□□□ -0.33
FOXRED1-211ENST00000531257 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 FAM86B1E9PN63 330 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 CCNE2O96020 404 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 FAM86B2P0C5J1 330 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 HSPA4P34932 840 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 RCAN1P53805 252 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 AKAP17AQ02040 695 aaKnown RBP12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 PAK2Q13177 524 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 TCEAL5Q5H9L2 206 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 MTHFD1LQ6UB35 978 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 TEX2Q8IWB9 1127 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 CKAP2LQ8IYA6 745 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 PHKBQ93100 1093 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 ZNF577Q9BSK1 485 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 CELF4Q9BZC1 486 aaKnown RBP12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 C6orf50Q9HD87 102 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 ZNF302Q9NR11 478 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 TCEAL9Q9UHQ7 104 aa12.98□□□□□ -0.33
FOXRED1-211ENST00000531257 H3BQ06 376 aaPredicted RBP12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 IPO5O00410 1097 aaKnown RBP12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 ADAMTS3O15072 1205 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 HBP1O60381 514 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 DGKIO75912 1065 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 ATG7O95352 703 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 IL9P15248 144 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 KLRC1P26715 233 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 SLC26A2P50443 739 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 KRT76Q01546 638 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 NFX1Q12986 1120 aaKnown RBP12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 TMEM266Q2M3C6 531 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 LEXMQ3ZCV2 418 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 PAN2Q504Q3 1202 aaKnown RBP12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 SWSAP1Q6NVH7 229 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 MIS18BP1Q6P0N0 1132 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 PDXDC2PQ6P474 469 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 ABHD15Q6UXT9 468 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 NIPA1Q7RTP0 329 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 CCDC60Q8IWA6 550 aaPredicted RBP12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 REXO1Q8N1G1 1221 aaKnown RBP12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 LINC01599Q8WXQ3 324 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 PPP1R16BQ96T49 567 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 C1QTNF1Q9BXJ1 281 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 FTHL17Q9BXU8 183 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 NSUN3Q9H649 340 aaKnown RBP12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 EPHX3Q9H6B9 360 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 PADI3Q9ULW8 664 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 RWDD3Q9Y3V2 267 aa12.97□□□□□ -0.33
FOXRED1-211ENST00000531257 BRWD1Q9NSI6 2320 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 IGSF9BQ9UPX0 1349 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 IGLV3-22A0A075B6J6 115 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 IGKV6D-21A0A0A0MT36 114 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 SMIM35A0A1B0GVV1 85 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 GRM6O15303 877 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 PRPF3O43395 683 aaKnown RBP12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 RB1P06400 928 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 RPS6KB1P23443 525 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 GNA11P29992 359 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 BMPR1AP36894 532 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 SETQ01105 290 aaPredicted RBP12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 PRR16Q569H4 304 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 PTCRAQ6ISU1 281 aaPredicted RBP12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 RTN4RL1Q86UN2 441 aaPredicted RBP12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 NME8Q8N427 588 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 RASGRP4Q8TDF6 673 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 ATP8B4Q8TF62 1192 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 KCNB2Q92953 911 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 ZNF689Q96CS4 500 aaPredicted RBP12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 C11orf84Q9BUA3 381 aaPredicted RBP12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 SLC26A6Q9BXS9 759 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 ZMYND12Q9H0C1 365 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 RC3H2Q9HBD1 1191 aaKnown RBP12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 CLDND1Q9NY35 253 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 LRFN2Q9ULH4 789 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 SAMM50Q9Y512 469 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 SQORQ9Y6N5 450 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 BDP1A6H8Y1 2624 aa12.96□□□□□ -0.33
FOXRED1-211ENST00000531257 C5orf42Q9H799 3197 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 ESYT2A0FGR8 921 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 C5orf67F2Z3F1 127 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 REC8O95072 547 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 CYP3A4P08684 503 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 STAG3L1P0CL83 205 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 PSMA5P28066 241 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 SSTR3P32745 418 aaPredicted RBP12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 PKN1Q16512 942 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 ZNF484Q5JVG2 852 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 MCTP2Q6DN12 878 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 NPAS4Q8IUM7 802 aa12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.34
FOXRED1-211ENST00000531257 PABPC5Q96DU9 382 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms