RNA–Protein interactions for RNA: ENST00000529464.5

FDFT1-215, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-215ENST00000529464 NEK9Q8TD19 979 aa16.24■□□□□ 0.19
FDFT1-215ENST00000529464 ZNF689Q96CS4 500 aaPredicted RBP16.24■□□□□ 0.19
FDFT1-215ENST00000529464 LRFN3Q9BTN0 628 aa16.24■□□□□ 0.19
FDFT1-215ENST00000529464 NSUN3Q9H649 340 aaKnown RBP16.24■□□□□ 0.19
FDFT1-215ENST00000529464 C11orf16Q9NQ32 467 aa16.24■□□□□ 0.19
FDFT1-215ENST00000529464 PADI3Q9ULW8 664 aa16.24■□□□□ 0.19
FDFT1-215ENST00000529464 PCDHA2Q9Y5H9 948 aa16.24■□□□□ 0.19
FDFT1-215ENST00000529464 GRXCR2A6NFK2 248 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 hCG_1984214I3L0E3 225 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 BACH1O14867 736 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 DGKIO75912 1065 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 ATG7O95352 703 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 METAP2P50579 478 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■□□□ 12.1
FDFT1-215ENST00000529464 FGD1P98174 961 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 KRT32Q14532 448 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 PFKFB3Q16875 520 aaPredicted RBP16.23■□□□□ 0.19
FDFT1-215ENST00000529464 PAN2Q504Q3 1202 aaKnown RBP16.23■□□□□ 0.19
FDFT1-215ENST00000529464 IER5Q5VY09 327 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 MTHFD1LQ6UB35 978 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 ABHD15Q6UXT9 468 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 Q6ZUG5 572 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 PLA2G4DQ86XP0 818 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 CCDC60Q8IWA6 550 aaPredicted RBP16.23■□□□□ 0.19
FDFT1-215ENST00000529464 FAM178BQ8IXR5 827 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 ZNF713Q8N859 430 aaPredicted RBP16.23■□□□□ 0.19
FDFT1-215ENST00000529464 JAKMIP1Q96N16 626 aaKnown RBP16.23■□□□□ 0.19
FDFT1-215ENST00000529464 CELF4Q9BZC1 486 aaKnown RBP16.23■□□□□ 0.19
FDFT1-215ENST00000529464 TMX1Q9H3N1 280 aa16.23■□□□□ 0.19
FDFT1-215ENST00000529464 MRPL42Q9Y6G3 142 aaKnown RBP16.23■□□□□ 0.19
FDFT1-215ENST00000529464 IGLV3-22A0A075B6J6 115 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 IGKV6D-21A0A0A0MT36 114 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 C5orf67F2Z3F1 127 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 DHX15O43143 795 aaKnown RBP16.22■□□□□ 0.19
FDFT1-215ENST00000529464 SCG2P13521 617 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 PAK2Q13177 524 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 GJD3Q8N144 294 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 CRIPAKQ8N1N5 446 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 RASGRP4Q8TDF6 673 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 CRYGNQ8WXF5 182 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 CLP1Q92989 425 aaKnown RBP16.22■□□□□ 0.19
FDFT1-215ENST00000529464 BRF1Q92994 677 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 PABPC5Q96DU9 382 aaKnown RBP16.22■□□□□ 0.19
FDFT1-215ENST00000529464 PPP1R16BQ96T49 567 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 C11orf84Q9BUA3 381 aaPredicted RBP16.22■□□□□ 0.19
FDFT1-215ENST00000529464 CDHR5Q9HBB8 845 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 ALG13Q9NP73 1137 aaKnown RBP16.22■□□□□ 0.19
FDFT1-215ENST00000529464 CLDND1Q9NY35 253 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 GINS2Q9Y248 185 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 SNX14Q9Y5W7 946 aa16.22■□□□□ 0.19
FDFT1-215ENST00000529464 IGSF9BQ9UPX0 1349 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 SMIM35A0A1B0GVV1 85 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 M0QZ92 97 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 RB1P06400 928 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 ATP4AP20648 1035 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 KLRC1P26715 233 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 SSTR3P32745 418 aaPredicted RBP16.21■□□□□ 0.19
FDFT1-215ENST00000529464 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.199e-7■■■□□ 15.3
FDFT1-215ENST00000529464 KRT76Q01546 638 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 DLX2Q07687 328 aaPredicted RBP16.21■□□□□ 0.19
FDFT1-215ENST00000529464 HYAL1Q12794 435 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 COL19A1Q14993 1142 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 CLUL1Q15846 466 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 PKN1Q16512 942 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 SWSAP1Q6NVH7 229 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 TRMT1LQ7Z2T5 733 aaKnown RBP16.21■□□□□ 0.19
FDFT1-215ENST00000529464 ATP8B4Q8TF62 1192 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 TMEM40Q8WWA1 233 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 PHKBQ93100 1093 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 ZNF302Q9NR11 478 aa16.21■□□□□ 0.19
FDFT1-215ENST00000529464 ZBTB42B2RXF5 422 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 IPO5O00410 1097 aaKnown RBP16.2■□□□□ 0.18
FDFT1-215ENST00000529464 LINC01565O15544 149 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 MGEA5O60502 916 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 HMGB1P09429 215 aaKnown RBP16.2■□□□□ 0.18
FDFT1-215ENST00000529464 DNAJB1P25685 340 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 LTBRP36941 435 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 RCAN1P53805 252 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 CAMK1Q14012 370 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 TMEM31Q5JXX7 168 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 FAM160B1Q5W0V3 765 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 PDXDC2PQ6P474 469 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 NIPA1Q7RTP0 329 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 NPAS4Q8IUM7 802 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 KIAA0319LQ8IZA0 1049 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 KCNB2Q92953 911 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 GLT8D2Q9H1C3 349 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 IGFLR1Q9H665 355 aa16.2■□□□□ 0.18
FDFT1-215ENST00000529464 NOC2LQ9Y3T9 749 aaKnown RBP16.2■□□□□ 0.18
FDFT1-215ENST00000529464 PI4K2BG5E9Z4 385 aa16.19■□□□□ 0.18
FDFT1-215ENST00000529464 HBP1O60381 514 aa16.19■□□□□ 0.18
FDFT1-215ENST00000529464 RPLP2P05387 115 aaKnown RBP16.19■□□□□ 0.18
FDFT1-215ENST00000529464 CYP3A4P08684 503 aa16.19■□□□□ 0.18
FDFT1-215ENST00000529464 HSPA4P34932 840 aa16.19■□□□□ 0.18
FDFT1-215ENST00000529464 SLC26A2P50443 739 aa16.19■□□□□ 0.18
FDFT1-215ENST00000529464 NFX1Q12986 1120 aaKnown RBP16.19■□□□□ 0.18
FDFT1-215ENST00000529464 MIS18BP1Q6P0N0 1132 aa16.19■□□□□ 0.18
FDFT1-215ENST00000529464 TEX2Q8IWB9 1127 aa16.19■□□□□ 0.18
FDFT1-215ENST00000529464 CMTR2Q8IYT2 770 aaKnown RBP16.19■□□□□ 0.18
FDFT1-215ENST00000529464 REXO1Q8N1G1 1221 aaKnown RBP16.19■□□□□ 0.18
FDFT1-215ENST00000529464 TNPO1Q92973 898 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms