RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ATG7O95352 703 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 AKAP17AQ02040 695 aaKnown RBP25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 TCEAL5Q5H9L2 206 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 BLOC1S2Q6QNY1 142 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 MTHFD1LQ6UB35 978 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 NIPA1Q7RTP0 329 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 NME8Q8N427 588 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 C11orf84Q9BUA3 381 aaPredicted RBP25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 FTHL17Q9BXU8 183 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 NSUN3Q9H649 340 aaKnown RBP25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 C6orf50Q9HD87 102 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 RAPGEFL1Q9UHV5 662 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 GINS2Q9Y248 185 aa25.46■■□□□ 1.67
TRAPPC4-208ENST00000527680 HBP1O60381 514 aa25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 IBSPP21815 317 aaPredicted RBP25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 KLRC1P26715 233 aa25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 KRT76Q01546 638 aa25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 PAK2Q13177 524 aa25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 PTCRAQ6ISU1 281 aaPredicted RBP25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 CKAP2LQ8IYA6 745 aa25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 CCDC12Q8WUD4 166 aaPredicted RBP25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 ZNF302Q9NR11 478 aa25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 PADI3Q9ULW8 664 aa25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 TTC3P53804 2025 aa25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 MYO7AQ13402 2215 aa25.45■■□□□ 1.66
TRAPPC4-208ENST00000527680 SMIM35A0A1B0GVV1 85 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 FAM86B1E9PN63 330 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 H3BQ06 376 aaPredicted RBP25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 DGKIO75912 1065 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 CCNE2O96020 404 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 FAM86B2P0C5J1 330 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 NFX1Q12986 1120 aaKnown RBP25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 MCTP2Q6DN12 878 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 SWSAP1Q6NVH7 229 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 MIS18BP1Q6P0N0 1132 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 PDXDC2PQ6P474 469 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 ABHD15Q6UXT9 468 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 RTN4RL1Q86UN2 441 aaPredicted RBP25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 TCEAL9Q9UHQ7 104 aa25.44■■□□□ 1.66
TRAPPC4-208ENST00000527680 LOXHD1Q8IVV2 1947 aa25.43■■□□□ 1.66
TRAPPC4-208ENST00000527680 C5orf67F2Z3F1 127 aa25.43■■□□□ 1.66
TRAPPC4-208ENST00000527680 IPO5O00410 1097 aaKnown RBP25.43■■□□□ 1.66
TRAPPC4-208ENST00000527680 STAG3L1P0CL83 205 aa25.43■■□□□ 1.66
TRAPPC4-208ENST00000527680 TRMT1LQ7Z2T5 733 aaKnown RBP25.43■■□□□ 1.66
TRAPPC4-208ENST00000527680 ZNF577Q9BSK1 485 aa25.43■■□□□ 1.66
TRAPPC4-208ENST00000527680 LRFN2Q9ULH4 789 aa25.43■■□□□ 1.66
TRAPPC4-208ENST00000527680 SNX14Q9Y5W7 946 aa25.43■■□□□ 1.66
TRAPPC4-208ENST00000527680 RALGAPA2Q2PPJ7 1873 aa25.43■■□□□ 1.66
TRAPPC4-208ENST00000527680 IGKV6D-21A0A0A0MT36 114 aa25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 GRM6O15303 877 aa25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 PRPF3O43395 683 aaKnown RBP25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 CSPG5O95196 566 aa25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 CYP3A4P08684 503 aa25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 GNA11P29992 359 aa25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 SSTR3P32745 418 aaPredicted RBP25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 PUS10Q3MIT2 529 aaKnown RBP25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 REXO1Q8N1G1 1221 aaKnown RBP25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 ATP8B4Q8TF62 1192 aa25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 ZNF689Q96CS4 500 aaPredicted RBP25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 PABPC5Q96DU9 382 aaKnown RBP25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 ZMYND12Q9H0C1 365 aa25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 TBC1D22BQ9NU19 505 aa25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 CLDND1Q9NY35 253 aa25.42■■□□□ 1.66
TRAPPC4-208ENST00000527680 IGSF9BQ9UPX0 1349 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 IL9P15248 144 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 HSPA4P34932 840 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 TMEM266Q2M3C6 531 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 PAN2Q504Q3 1202 aaKnown RBP25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 ZNF484Q5JVG2 852 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 NPAS4Q8IUM7 802 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 CCDC60Q8IWA6 550 aaPredicted RBP25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 FAM178BQ8IXR5 827 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 LINC01599Q8WXQ3 324 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 KCNB2Q92953 911 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 CLP1Q92989 425 aaKnown RBP25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 PHKBQ93100 1093 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 CCDC136Q96JN2 1154 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 LMAN2LQ9H0V9 348 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 CD320Q9NPF0 282 aa25.41■■□□□ 1.66
TRAPPC4-208ENST00000527680 COL4A6Q14031 1691 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 ESYT2A0FGR8 921 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 GRXCR2A6NFK2 248 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 DHX15O43143 795 aaKnown RBP25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 NCK2O43639 380 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 PPFIA3O75145 1194 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 PSMA5P28066 241 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 GJD3Q8N144 294 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 NEK9Q8TD19 979 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 RC3H2Q9HBD1 1191 aaKnown RBP25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 ALG13Q9NP73 1137 aaKnown RBP25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 FAM50BQ9Y247 325 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 SAMM50Q9Y512 469 aa25.4■■□□□ 1.66
TRAPPC4-208ENST00000527680 EVPLQ92817 2033 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 IGLV3-22A0A075B6J6 115 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 ADAMTS3O15072 1205 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 RPS6KA5O75582 802 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 RPS6KB1P23443 525 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 PKN1Q16512 942 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 PRR16Q569H4 304 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms