RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 WWC2Q6AWC2 1192 aa27.38■■□□□ 1.97
USP47-205ENST00000525257 CMTR2Q8IYT2 770 aaKnown RBP27.38■■□□□ 1.97
USP47-205ENST00000525257 SQORQ9Y6N5 450 aa27.38■■□□□ 1.97
USP47-205ENST00000525257 ARP10275 920 aa27.37■■□□□ 1.97
USP47-205ENST00000525257 PAK2Q13177 524 aa27.37■■□□□ 1.97
USP47-205ENST00000525257 CRIPAKQ8N1N5 446 aa27.37■■□□□ 1.97
USP47-205ENST00000525257 P2RX5Q93086 422 aa27.37■■□□□ 1.97
USP47-205ENST00000525257 ESYT1Q9BSJ8 1104 aa27.37■■□□□ 1.97
USP47-205ENST00000525257 PCDHA2Q9Y5H9 948 aa27.37■■□□□ 1.97
USP47-205ENST00000525257 NFASCO94856 1347 aa27.37■■□□□ 1.97
USP47-205ENST00000525257 CNTNAP5Q8WYK1 1306 aa27.37■■□□□ 1.97
USP47-205ENST00000525257 IGSF9BQ9UPX0 1349 aa27.37■■□□□ 1.97
USP47-205ENST00000525257 ITGB1P05556 798 aa27.36■■□□□ 1.97
USP47-205ENST00000525257 IBSPP21815 317 aaPredicted RBP27.36■■□□□ 1.97
USP47-205ENST00000525257 DNAJB1P25685 340 aa27.36■■□□□ 1.97
USP47-205ENST00000525257 STAT5BP51692 787 aa27.36■■□□□ 1.97
USP47-205ENST00000525257 NAPAP54920 295 aa27.36■■□□□ 1.97
USP47-205ENST00000525257 TYW1BQ6NUM6 668 aa27.36■■□□□ 1.97
USP47-205ENST00000525257 TNPO1Q92973 898 aaKnown RBP27.36■■□□□ 1.97
USP47-205ENST00000525257 CELF4Q9BZC1 486 aaKnown RBP27.36■■□□□ 1.97
USP47-205ENST00000525257 TRIOO75962 3097 aa27.36■■□□□ 1.97
USP47-205ENST00000525257 STAG3L1P0CL83 205 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 SCG2P13521 617 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 GATMP50440 423 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 ITGB3BPQ13352 177 aaPredicted RBP27.35■■□□□ 1.97
USP47-205ENST00000525257 SMAD4Q13485 552 aaKnown RBP27.35■■□□□ 1.97
USP47-205ENST00000525257 NECTIN1Q15223 517 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 SYNE3Q6ZMZ3 975 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 PLPPR4Q7Z2D5 763 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 SGMS1Q86VZ5 419 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 POP1Q99575 1024 aaKnown RBP27.35■■□□□ 1.97
USP47-205ENST00000525257 UPF3BQ9BZI7 483 aaKnown RBP27.35■■□□□ 1.97
USP47-205ENST00000525257 RIC8AQ9NPQ8 531 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 ANO2Q9NQ90 1003 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 CD207Q9UJ71 328 aa27.35■■□□□ 1.97
USP47-205ENST00000525257 NDUFV1P49821 464 aa27.34■■□□□ 1.97
USP47-205ENST00000525257 ADAM15Q13444 863 aa27.34■■□□□ 1.97
USP47-205ENST00000525257 TMEM266Q2M3C6 531 aa27.34■■□□□ 1.97
USP47-205ENST00000525257 KLHL23Q8NBE8 558 aa27.34■■□□□ 1.97
USP47-205ENST00000525257 SPPL3Q8TCT6 385 aa27.34■■□□□ 1.97
USP47-205ENST00000525257 ANO3Q9BYT9 981 aa27.34■■□□□ 1.97
USP47-205ENST00000525257 AGO4Q9HCK5 861 aaKnown RBP27.34■■□□□ 1.97
USP47-205ENST00000525257 SMIM35A0A1B0GVV1 85 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 KRT76Q01546 638 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 CEP55Q53EZ4 464 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 NAALADL2Q58DX5 795 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 APOA5Q6Q788 366 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 MTHFD1LQ6UB35 978 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 ADGRD2Q7Z7M1 963 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 PPP2R3CQ969Q6 453 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 TMX1Q9H3N1 280 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 MUTYHQ9UIF7 546 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 LRFN2Q9ULH4 789 aa27.33■■□□□ 1.97
USP47-205ENST00000525257 DDX39AO00148 427 aaKnown RBP27.32■■□□□ 1.96
USP47-205ENST00000525257 ADCY7P51828 1080 aa27.32■■□□□ 1.96
USP47-205ENST00000525257 PPP1R18Q6NYC8 613 aa27.32■■□□□ 1.96
USP47-205ENST00000525257 ALYREFQ86V81 257 aaKnown RBP27.32■■□□□ 1.96
USP47-205ENST00000525257 POF1BQ8WVV4 589 aa27.32■■□□□ 1.96
USP47-205ENST00000525257 RBM28Q9NW13 759 aaKnown RBP27.32■■□□□ 1.96
USP47-205ENST00000525257 TMEM260Q9NX78 707 aa27.32■■□□□ 1.96
USP47-205ENST00000525257 GINS2Q9Y248 185 aa27.32■■□□□ 1.96
USP47-205ENST00000525257 KDM3AQ9Y4C1 1321 aa27.32■■□□□ 1.96
USP47-205ENST00000525257 PLXNA4Q9HCM2 1894 aa27.32■■□□□ 1.96
USP47-205ENST00000525257 STXBP3O00186 592 aa27.31■■□□□ 1.96
USP47-205ENST00000525257 FOSP01100 380 aaPredicted RBP27.31■■□□□ 1.96
USP47-205ENST00000525257 NFX1Q12986 1120 aaKnown RBP27.31■■□□□ 1.96
USP47-205ENST00000525257 NME8Q8N427 588 aa27.31■■□□□ 1.96
USP47-205ENST00000525257 WDFY4Q6ZS81 3184 aa27.31■■□□□ 1.96
USP47-205ENST00000525257 BACH1O14867 736 aa27.3■■□□□ 1.96
USP47-205ENST00000525257 ATG7O95352 703 aa27.3■■□□□ 1.96
USP47-205ENST00000525257 KLRC1P26715 233 aa27.3■■□□□ 1.96
USP47-205ENST00000525257 RTN1Q16799 776 aa27.3■■□□□ 1.96
USP47-205ENST00000525257 RNF135Q8IUD6 432 aa27.3■■□□□ 1.96
USP47-205ENST00000525257 MSLNLQ96KJ4 702 aa27.3■■□□□ 1.96
USP47-205ENST00000525257 TCEANC2Q96MN5 208 aa27.3■■□□□ 1.96
USP47-205ENST00000525257 PCDHGC5Q9Y5F6 944 aa27.3■■□□□ 1.96
USP47-205ENST00000525257 V9GY48 417 aaPredicted RBP27.3■■□□□ 1.96
USP47-205ENST00000525257 SMCO2A6NFE2 343 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 MEIS1O00470 390 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 CCNE2O96020 404 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 ZNF76P36508 570 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 SREBF1P36956 1147 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 NRIP1P48552 1158 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 SARSP49591 514 aaKnown RBP27.29■■□□□ 1.96
USP47-205ENST00000525257 SLC26A2P50443 739 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 FUT2Q10981 343 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 HFE2Q6ZVN8 426 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 RBM23Q86U06 439 aaKnown RBP27.29■■□□□ 1.96
USP47-205ENST00000525257 EFHBQ8N7U6 833 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 CLEC1BQ9P126 229 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 BRPF3Q9ULD4 1205 aa27.29■■□□□ 1.96
USP47-205ENST00000525257 IGKV6D-21A0A0A0MT36 114 aa27.28■■□□□ 1.96
USP47-205ENST00000525257 ZBTB43O43298 467 aa27.28■■□□□ 1.96
USP47-205ENST00000525257 MGEA5O60502 916 aa27.28■■□□□ 1.96
USP47-205ENST00000525257 PPFIA3O75145 1194 aa27.28■■□□□ 1.96
USP47-205ENST00000525257 HERC4Q5GLZ8 1057 aaPredicted RBP27.28■■□□□ 1.96
USP47-205ENST00000525257 FAM160B1Q5W0V3 765 aa27.28■■□□□ 1.96
USP47-205ENST00000525257 CCDC60Q8IWA6 550 aaPredicted RBP27.28■■□□□ 1.96
USP47-205ENST00000525257 CDHR5Q9HBB8 845 aa27.28■■□□□ 1.96
USP47-205ENST00000525257 ERVK-5Q9HDB9 667 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms