RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 BADQ92934 168 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 ATP6V0A1Q93050 837 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 EPSTI1Q96J88 318 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 NAP1L4Q99733 375 aaKnown RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 LXNQ9BS40 222 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 HTATIP2Q9BUP3 242 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 PANK2Q9BZ23 570 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 FAM49AQ9H0Q0 323 aaPredicted RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 CSRNP2Q9H175 543 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 PDLIM7Q9NR12 457 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 TMEM39AQ9NV64 488 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 ERAP1Q9NZ08 941 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 LRWD1Q9UFC0 647 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 GTF2IRD1Q9UHL9 959 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 ZNF215Q9UL58 517 aaPredicted RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 NOD1Q9Y239 953 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 MAFBQ9Y5Q3 323 aaPredicted RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 EMSYQ7Z589 1322 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 IGSF9BQ9UPX0 1349 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 FRMPD3Q5JV73 1810 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 DOCK5Q9H7D0 1870 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 ZBTB42B2RXF5 422 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 E9PMD0 336 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 TBX3O15119 743 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 TLR3O15455 904 aaKnown RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 CSDE1O75534 798 aaKnown RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 STBD1O95210 358 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 CD4P01730 458 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 OATP04181 439 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 P4HBP07237 508 aaKnown RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 CLTBP09497 229 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 SPATA31C1P0DKV0 1188 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 ACRP10323 421 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 RAG1P15918 1043 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 IBSPP21815 317 aaPredicted RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 KLRC1P26715 233 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 SFNP31947 248 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 DDIT3P35638 169 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 THPOP40225 353 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 QARSP47897 775 aaKnown RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 TRAPPC10P48553 1259 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 CLCN3P51790 818 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 EPHB4P54760 987 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 PSMC5P62195 406 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 CACNB1Q02641 598 aaPredicted RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 DRP2Q13474 957 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 SNX17Q15036 470 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 KARSQ15046 597 aaKnown RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 STK38Q15208 465 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 TMEM266Q2M3C6 531 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 TCTN1Q2MV58 587 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 ZNF618Q5T7W0 954 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 NFRKBQ6P4R8 1299 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 MTHFD1LQ6UB35 978 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 DTHD1Q6ZMT9 781 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 ANO5Q75V66 913 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 PLPPR4Q7Z2D5 763 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 ANKRD33Q7Z3H0 272 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 KCNK18Q7Z418 384 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 DEFB128Q7Z7B8 93 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 CATSPER3Q86XQ3 398 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 METTL13Q8N6R0 699 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 AFAP1L1Q8TED9 768 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 ATP8B4Q8TF62 1192 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 LRRC15Q8TF66 581 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 DNAJB3Q8WWF6 145 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 MMTAG2Q9BU76 263 aaKnown RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 KATNAL1Q9BW62 490 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 WNT8AQ9H1J5 351 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 HIPK3Q9H422 1215 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 ZSCAN16Q9H4T2 348 aaPredicted RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 SUGCTQ9HAC7 445 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 CDHR5Q9HBB8 845 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 DDX19AQ9NUU7 478 aaKnown RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 TUBE1Q9UJT0 475 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 FBXO2Q9UK22 296 aaPredicted RBP5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 GINS2Q9Y248 185 aa5.16□□□□□ -1.58
CHMP4A-202ENST00000524955 MYH7BA7E2Y1 1941 aa5.15□□□□□ -1.58
CHMP4A-202ENST00000524955 A0A087X0B3 334 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 NPHP3-ACAD11A0A0J9YXS1 232 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 SPTLC2O15270 562 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 HBP1O60381 514 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 USO1O60763 962 aaKnown RBP5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 VTNP04004 478 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 SSBP05455 408 aaKnown RBP eCLIP5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 CKBP12277 381 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 CSF2RAP15509 400 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 FGFR4P22455 802 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 YWHABP31946 246 aaKnown RBP5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 MAGEA10P43363 369 aaPredicted RBP5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 FXR2P51116 673 aaKnown RBP eCLIP5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 ADAM17P78536 824 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 RAD51AP2Q09MP3 1159 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 GRB10Q13322 594 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 SLC39A14Q15043 492 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 KIZQ2M2Z5 673 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 TRIM71Q2Q1W2 868 aaKnown RBP5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 XKR9Q5GH70 373 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 XKR3Q5GH77 459 aa5.15□□□□□ -1.59
CHMP4A-202ENST00000524955 EFCAB12Q6NXP0 572 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms