RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 BACH1O14867 736 aa17.6■□□□□ 0.41
MRPS28-209ENST00000522987 STAT5BP51692 787 aa17.6■□□□□ 0.41
MRPS28-209ENST00000522987 NEK9Q8TD19 979 aa17.6■□□□□ 0.41
MRPS28-209ENST00000522987 PABPC5Q96DU9 382 aaKnown RBP17.6■□□□□ 0.41
MRPS28-209ENST00000522987 RC3H2Q9HBD1 1191 aaKnown RBP17.6■□□□□ 0.41
MRPS28-209ENST00000522987 PADI3Q9ULW8 664 aa17.6■□□□□ 0.41
MRPS28-209ENST00000522987 MRPL42Q9Y6G3 142 aaKnown RBP17.6■□□□□ 0.41
MRPS28-209ENST00000522987 POTEB3A0JP26 581 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 MAFGO15525 162 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 LINC01565O15544 149 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 CCNE2O96020 404 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 PLA2G5P39877 138 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 DLX2Q07687 328 aaPredicted RBP17.59■□□□□ 0.41
MRPS28-209ENST00000522987 HYAL1Q12794 435 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 CEP55Q53EZ4 464 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 IER5Q5VY09 327 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 POTEBQ6S5H4 581 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 DHX32Q7L7V1 743 aaKnown RBP17.59■□□□□ 0.41
MRPS28-209ENST00000522987 C11orf84Q9BUA3 381 aaPredicted RBP17.59■□□□□ 0.41
MRPS28-209ENST00000522987 CDHR5Q9HBB8 845 aa17.59■□□□□ 0.41
MRPS28-209ENST00000522987 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
MRPS28-209ENST00000522987 NFASCO94856 1347 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 DGKIO75912 1065 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 ADD1P35611 737 aaKnown RBP17.58■□□□□ 0.4
MRPS28-209ENST00000522987 FGD1P98174 961 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 APOBRQ0VD83 1088 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 NFX1Q12986 1120 aaKnown RBP17.58■□□□□ 0.4
MRPS28-209ENST00000522987 PAK2Q13177 524 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 BMP2KLQ5H9B9 411 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 MTHFD1LQ6UB35 978 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 PLA2G4DQ86XP0 818 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 ZNF689Q96CS4 500 aaPredicted RBP17.58■□□□□ 0.4
MRPS28-209ENST00000522987 CELF4Q9BZC1 486 aaKnown RBP17.58■□□□□ 0.4
MRPS28-209ENST00000522987 BARHL2Q9NY43 387 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 PCDHA2Q9Y5H9 948 aa17.58■□□□□ 0.4
MRPS28-209ENST00000522987 C5orf42Q9H799 3197 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 FAM86B1E9PN63 330 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 C5orf67F2Z3F1 127 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 PI4K2BG5E9Z4 385 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 MEIS1O00470 390 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 FOSP01100 380 aaPredicted RBP17.57■□□□□ 0.4
MRPS28-209ENST00000522987 FAM86B2P0C5J1 330 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 DNAJB1P25685 340 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 KLRC1P26715 233 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 LTBRP36941 435 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 SREBF1P36956 1147 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 KRT76Q01546 638 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 PPP1R18Q6NYC8 613 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 CCDC60Q8IWA6 550 aaPredicted RBP17.57■□□□□ 0.4
MRPS28-209ENST00000522987 TMX1Q9H3N1 280 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 PCDHGC5Q9Y5F6 944 aa17.57■□□□□ 0.4
MRPS28-209ENST00000522987 IGSF9BQ9UPX0 1349 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 MGEA5O60502 916 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 RB1P06400 928 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 CLK2P49760 499 aaKnown RBP17.56■□□□□ 0.4
MRPS28-209ENST00000522987 SWSAP1Q6NVH7 229 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 PDXDC2PQ6P474 469 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 PLPPR4Q7Z2D5 763 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 NPAS4Q8IUM7 802 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 CKAP2LQ8IYA6 745 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 RASGRP4Q8TDF6 673 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 CLP1Q92989 425 aaKnown RBP17.56■□□□□ 0.4
MRPS28-209ENST00000522987 HCSTQ9UBK5 93 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 LRFN2Q9ULH4 789 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 HCN4Q9Y3Q4 1203 aa17.56■□□□□ 0.4
MRPS28-209ENST00000522987 SMIM35A0A1B0GVV1 85 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 GPR37L1O60883 481 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 TBX10O75333 385 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 CDC45O75419 566 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 ITGB1P05556 798 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 SCG2P13521 617 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 IRS1P35568 1242 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 METAP2P50579 478 aaKnown RBP eCLIP17.55■□□□□ 0.4
MRPS28-209ENST00000522987 CAMK1Q14012 370 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 ABHD15Q6UXT9 468 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 Q6ZUG5 572 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 ADGRD2Q7Z7M1 963 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 KLHL23Q8NBE8 558 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 JAKMIP1Q96N16 626 aaKnown RBP17.55■□□□□ 0.4
MRPS28-209ENST00000522987 ZNF302Q9NR11 478 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 PLAGL2Q9UPG8 496 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 NOC2LQ9Y3T9 749 aaKnown RBP17.55■□□□□ 0.4
MRPS28-209ENST00000522987 RWDD3Q9Y3V2 267 aa17.55■□□□□ 0.4
MRPS28-209ENST00000522987 ATG7O95352 703 aa17.54■□□□□ 0.4
MRPS28-209ENST00000522987 ATP4AP20648 1035 aa17.54■□□□□ 0.4
MRPS28-209ENST00000522987 ZP2Q05996 745 aa17.54■□□□□ 0.4
MRPS28-209ENST00000522987 AP3B2Q13367 1082 aa17.54■□□□□ 0.4
MRPS28-209ENST00000522987 SPOUT1Q5T280 376 aaKnown RBP17.54■□□□□ 0.4
MRPS28-209ENST00000522987 FAM160B1Q5W0V3 765 aa17.54■□□□□ 0.4
MRPS28-209ENST00000522987 RBM23Q86U06 439 aaKnown RBP17.54■□□□□ 0.4
MRPS28-209ENST00000522987 CMTR2Q8IYT2 770 aaKnown RBP17.54■□□□□ 0.4
MRPS28-209ENST00000522987 TMEM40Q8WWA1 233 aa17.54■□□□□ 0.4
MRPS28-209ENST00000522987 BRF1Q92994 677 aa17.54■□□□□ 0.4
MRPS28-209ENST00000522987 PHKBQ93100 1093 aa17.54■□□□□ 0.4
MRPS28-209ENST00000522987 ZNF668Q96K58 619 aaPredicted RBP17.54■□□□□ 0.4
MRPS28-209ENST00000522987 LMAN2LQ9H0V9 348 aa17.54■□□□□ 0.4
MRPS28-209ENST00000522987 IGLV3-22A0A075B6J6 115 aa17.53■□□□□ 0.4
MRPS28-209ENST00000522987 IPO5O00410 1097 aaKnown RBP17.53■□□□□ 0.4
MRPS28-209ENST00000522987 DHX15O43143 795 aaKnown RBP17.53■□□□□ 0.4
MRPS28-209ENST00000522987 HBP1O60381 514 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms