RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 DISP2A7MBM2 1401 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 USP17L5A8MUK1 530 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 POTECB2RU33 542 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 CALRP27797 417 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 PSMD2Q13200 908 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 PABPC4Q13310 644 aaKnown RBP eCLIP13.95□□□□□ -0.186e-8■■■■■ 34.2
TRAPPC9-208ENST00000520857 ASTE1Q2TB18 679 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 AGBL2Q5U5Z8 902 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 GJB7Q6PEY0 223 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 TEX11Q8IYF3 940 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 NSMCE1Q8WV22 266 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 PRMT1Q99873 361 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 NAGPAQ9UK23 515 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 UCHL3P15374 230 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 STAT1P42224 750 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 LRRC34Q8IZ02 419 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 TATDN2Q93075 761 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 KLHL29Q96CT2 875 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 NOL4O94818 638 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 AFPP02771 609 aaKnown RBP13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 PLA2G4BP0C869 781 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 NBPF9Q3BBW0 867 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 TMC3Q7Z5M5 1100 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 GCNT4Q9P109 453 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 SLC12A6Q9UHW9 1150 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 BAZ2AQ9UIF9 1905 aaKnown RBP13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 F8VZ95 297 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 TBCAO75347 108 aaKnown RBP13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 ACCSLQ4AC99 568 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 C3orf67Q6ZVT6 689 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 KIF2BQ8N4N8 673 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 FGFBP2Q9BYJ0 223 aa13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
TRAPPC9-208ENST00000520857 GCNT3O95395 438 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 PMS2P54278 862 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 TRIM68Q6AZZ1 485 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 GLYCTKQ8IVS8 523 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 CCDC105Q8IYK2 499 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 DAGLBQ8NCG7 672 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 TPCN2Q8NHX9 752 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 CUL5Q93034 780 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 TAOK3Q9H2K8 898 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 BSDC1Q9NW68 430 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 TMOD4Q9NZQ9 345 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 CTTNBP2NLQ9P2B4 639 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 TNFAIP3P21580 790 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 EIF3BP55884 814 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 CYP4A11Q02928 519 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 SLC35G1Q2M3R5 365 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 NBPF5PQ86XG9 351 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■■■■■ 55.6
TRAPPC9-208ENST00000520857 SPDL1Q96EA4 605 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 CEP63Q96MT8 703 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 DNAJC17Q9NVM6 304 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 BZW2Q9Y6E2 419 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 ATP6V1G2O95670 118 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 FGFR4P22455 802 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 SLC16A2P36021 539 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 C6orf89Q6UWU4 347 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 RDH13Q8NBN7 331 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 SLITRK6Q9H5Y7 841 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 OSGEPQ9NPF4 335 aa13.93□□□□□ -0.18
TRAPPC9-208ENST00000520857 SHBGP04278 402 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 LDHCP07864 332 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 LACTBP83111 547 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 SYN2Q92777 582 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 CEP95Q96GE4 821 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 GPR101Q96P66 508 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 NAP1L3Q99457 506 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 FAM167BQ9BTA0 163 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 NT5C3AQ9H0P0 336 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 DBR1Q9UK59 544 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 ECM29Q5VYK3 1845 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 KCPQ6ZWJ8 1503 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 PALM3A6NDB9 673 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 DIAPH2O60879 1101 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 NTSR2O95665 410 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 STAT3P40763 770 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 GALCP54803 685 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 ELF3P78545 371 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 TJP1Q07157 1748 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 SLC29A2Q14542 456 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 SBK1Q52WX2 424 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 NUGGCQ68CJ6 796 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 CLEC10AQ8IUN9 316 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 TRIM59Q8IWR1 403 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 GDAP1Q8TB36 358 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 KCNV2Q8TDN2 545 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 CALR3Q96L12 384 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 GSTTP1A0A1W2PQM5 241 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 LRRN2O75325 713 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 FGRP09769 529 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 DRD4P21917 467 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms