RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, human

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-204	ENST00000517525	ETNPPL	Q8TBG4	499 aa		27.85	■■■□□ 2.05
PVT1-204	ENST00000517525	BBX	Q8WY36	941 aa	Predicted RBP	27.85	■■■□□ 2.05
PVT1-204	ENST00000517525	SEPT8	Q92599	483 aa		27.85	■■■□□ 2.05
PVT1-204	ENST00000517525	APBB2	Q92870	758 aa		27.85	■■■□□ 2.05
PVT1-204	ENST00000517525	NAP1L4	Q99733	375 aa	Known RBP	27.85	■■■□□ 2.05
PVT1-204	ENST00000517525	LLPH	Q9BRT6	129 aa	Known RBP	27.85	■■■□□ 2.05
PVT1-204	ENST00000517525	NKX2-4	Q9H2Z4	354 aa		27.85	■■■□□ 2.05
PVT1-204	ENST00000517525	SLC28A3	Q9HAS3	691 aa		27.85	■■■□□ 2.05
PVT1-204	ENST00000517525	SQOR	Q9Y6N5	450 aa		27.85	■■■□□ 2.05
PVT1-204	ENST00000517525	KIF28P	B7ZC32	967 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	CTSH	P09668	335 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	JAK3	P52333	1124 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	LRCH2	Q5VUJ6	765 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	NEK8	Q86SG6	692 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	OXER1	Q8TDS5	423 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	DNAJB3	Q8WWF6	145 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	TNFRSF25	Q93038	417 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	TEKT3	Q9BXF9	490 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	DISC1	Q9NRI5	854 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	IGSF9B	Q9UPX0	1349 aa		27.84	■■■□□ 2.05
PVT1-204	ENST00000517525	ZBTB42	B2RXF5	422 aa		27.83	■■■□□ 2.05
PVT1-204	ENST00000517525	IGBP1	P78318	339 aa		27.83	■■■□□ 2.05
PVT1-204	ENST00000517525	MTHFD1L	Q6UB35	978 aa		27.83	■■■□□ 2.05
PVT1-204	ENST00000517525	FAM43B	Q6ZT52	329 aa	Predicted RBP	27.83	■■■□□ 2.05
PVT1-204	ENST00000517525	UIMC1	Q96RL1	719 aa		27.83	■■■□□ 2.05
PVT1-204	ENST00000517525	BRMS1	Q9HCU9	246 aa		27.83	■■■□□ 2.05
PVT1-204	ENST00000517525	SH2B1	Q9NRF2	756 aa	Predicted RBP	27.83	■■■□□ 2.05
PVT1-204	ENST00000517525	DDX25	Q9UHL0	483 aa	Known RBP	27.83	■■■□□ 2.05
PVT1-204	ENST00000517525	JAK2	O60674	1132 aa		27.82	■■■□□ 2.04
PVT1-204	ENST00000517525	KRT2	P35908	639 aa		27.82	■■■□□ 2.04
PVT1-204	ENST00000517525	MRPS6	P82932	125 aa	Known RBP	27.82	■■■□□ 2.04
PVT1-204	ENST00000517525	FAM167A	Q96KS9	214 aa		27.82	■■■□□ 2.04
PVT1-204	ENST00000517525	FAM20A	Q96MK3	541 aa		27.82	■■■□□ 2.04
PVT1-204	ENST00000517525	OSBPL7	Q9BZF2	842 aa		27.82	■■■□□ 2.04
PVT1-204	ENST00000517525	KCNMB3	Q9NPA1	279 aa		27.82	■■■□□ 2.04
PVT1-204	ENST00000517525	GABBR1	Q9UBS5	961 aa		27.82	■■■□□ 2.04
PVT1-204	ENST00000517525	KDM3A	Q9Y4C1	1321 aa		27.82	■■■□□ 2.04
PVT1-204	ENST00000517525	TBX3	O15119	743 aa		27.81	■■■□□ 2.04
PVT1-204	ENST00000517525	DTNB	O60941	627 aa		27.81	■■■□□ 2.04
PVT1-204	ENST00000517525	GJB5	O95377	273 aa		27.81	■■■□□ 2.04
PVT1-204	ENST00000517525	MMP1	P03956	469 aa		27.81	■■■□□ 2.04
PVT1-204	ENST00000517525	DEFB103A	P81534	67 aa		27.81	■■■□□ 2.04
PVT1-204	ENST00000517525	IER5	Q5VY09	327 aa		27.81	■■■□□ 2.04
PVT1-204	ENST00000517525	TRAPPC12	Q8WVT3	735 aa		27.81	■■■□□ 2.04
PVT1-204	ENST00000517525	MYLIP	Q8WY64	445 aa		27.81	■■■□□ 2.04
PVT1-204	ENST00000517525	UNC45A	Q9H3U1	944 aa		27.81	■■■□□ 2.04
PVT1-204	ENST00000517525	MYOG	P15173	224 aa		27.8	■■■□□ 2.04
PVT1-204	ENST00000517525	KLRC1	P26715	233 aa		27.8	■■■□□ 2.04
PVT1-204	ENST00000517525	RABEP1	Q15276	862 aa		27.8	■■■□□ 2.04
PVT1-204	ENST00000517525	LETM2	Q2VYF4	491 aa		27.8	■■■□□ 2.04
PVT1-204	ENST00000517525	PIK3AP1	Q6ZUJ8	805 aa		27.8	■■■□□ 2.04
PVT1-204	ENST00000517525	USP38	Q8NB14	1042 aa		27.8	■■■□□ 2.04
PVT1-204	ENST00000517525	CEP131	Q9UPN4	1083 aa		27.8	■■■□□ 2.04
PVT1-204	ENST00000517525	SAMM50	Q9Y512	469 aa		27.8	■■■□□ 2.04
PVT1-204	ENST00000517525	CDY2A	Q9Y6F7	541 aa		27.8	■■■□□ 2.04
PVT1-204	ENST00000517525	SLC37A4	O43826	429 aa		27.79	■■■□□ 2.04
PVT1-204	ENST00000517525	LPIN1	Q14693	890 aa		27.79	■■■□□ 2.04
PVT1-204	ENST00000517525	FBXO47	Q5MNV8	452 aa		27.79	■■■□□ 2.04
PVT1-204	ENST00000517525	PPP2R2D	Q66LE6	453 aa		27.79	■■■□□ 2.04
PVT1-204	ENST00000517525	RAD9A	Q99638	391 aa		27.79	■■■□□ 2.04
PVT1-204	ENST00000517525	IFIH1	Q9BYX4	1025 aa	Known RBP	27.79	■■■□□ 2.04
PVT1-204	ENST00000517525	ZNF862	O60290	1169 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	AMH	P03971	560 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	CA3	P07451	260 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	NR5A1	Q13285	461 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	EARS2	Q5JPH6	523 aa	Known RBP	27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	KRT40	Q6A162	431 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	CKAP2L	Q8IYA6	745 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	KIAA0319L	Q8IZA0	1049 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	ZBTB10	Q96DT7	871 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	NRBP2	Q9NSY0	501 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	TRPV2	Q9Y5S1	764 aa		27.78	■■■□□ 2.04
PVT1-204	ENST00000517525	MAGEB2	O15479	319 aa		27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	TLL1	O43897	1013 aa		27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	C22orf31	O95567	290 aa		27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	FOSL2	P15408	326 aa		27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	HMGN5	P82970	282 aa	Known RBP	27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	PPP2R5C	Q13362	524 aa		27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	TRIM29	Q14134	588 aa		27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	TSHZ1	Q6ZSZ6	1077 aa		27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	CCDC83	Q8IWF9	413 aa		27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	GJA10	Q969M2	543 aa		27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	FAM49A	Q9H0Q0	323 aa	Predicted RBP	27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	UPF2	Q9HAU5	1272 aa	Known RBP	27.77	■■■□□ 2.04
PVT1-204	ENST00000517525	OAT	P04181	439 aa		27.76	■■■□□ 2.03
PVT1-204	ENST00000517525	GHR	P10912	638 aa		27.76	■■■□□ 2.03
PVT1-204	ENST00000517525	MIER3	Q7Z3K6	550 aa		27.76	■■■□□ 2.03
PVT1-204	ENST00000517525	DIS3L2	Q8IYB7	885 aa	Known RBP	27.76	■■■□□ 2.03
PVT1-204	ENST00000517525	CELF4	Q9BZC1	486 aa	Known RBP	27.76	■■■□□ 2.03
PVT1-204	ENST00000517525	GBF1	Q92538	1859 aa		27.76	■■■□□ 2.03
PVT1-204	ENST00000517525	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	BTBD18	B2RXH4	712 aa		27.75	■■■□□ 2.03
PVT1-204	ENST00000517525		M0QZ92	97 aa		27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	CCNT1	O60563	726 aa	Known RBP	27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	HTRA4	P83105	476 aa	Predicted RBP	27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	TAP1	Q03518	808 aa		27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	ZNF710	Q8N1W2	664 aa		27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	LINC01465	Q8N7H1	131 aa		27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	HAS1	Q92839	578 aa		27.75	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms