RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 NEK9Q8TD19 979 aa27.42■■□□□ 1.98
CCND3-221ENST00000514588 CLP1Q92989 425 aaKnown RBP27.42■■□□□ 1.98
CCND3-221ENST00000514588 NSUN3Q9H649 340 aaKnown RBP27.42■■□□□ 1.98
CCND3-221ENST00000514588 FAM86B1E9PN63 330 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 DDX39AO00148 427 aaKnown RBP27.41■■□□□ 1.98
CCND3-221ENST00000514588 FAM86B2P0C5J1 330 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 SLC26A2P50443 739 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 BTG3Q14201 252 aaPredicted RBP27.41■■□□□ 1.98
CCND3-221ENST00000514588 COL19A1Q14993 1142 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 PTCRAQ6ISU1 281 aaPredicted RBP27.41■■□□□ 1.98
CCND3-221ENST00000514588 MTHFD1LQ6UB35 978 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 ABHD15Q6UXT9 468 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 FAM178BQ8IXR5 827 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 CRIPAKQ8N1N5 446 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 CRYGNQ8WXF5 182 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 KCNB2Q92953 911 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 C11orf84Q9BUA3 381 aaPredicted RBP27.41■■□□□ 1.98
CCND3-221ENST00000514588 CELF4Q9BZC1 486 aaKnown RBP27.41■■□□□ 1.98
CCND3-221ENST00000514588 RWDD3Q9Y3V2 267 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 MYO7AQ13402 2215 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 IGSF9BQ9UPX0 1349 aa27.41■■□□□ 1.98
CCND3-221ENST00000514588 SMIM35A0A1B0GVV1 85 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 H3BQ06 376 aaPredicted RBP27.4■■□□□ 1.98
CCND3-221ENST00000514588 M0QZ92 97 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 ADAMTS3O15072 1205 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 GRM6O15303 877 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 SCG2P13521 617 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 IL9P15248 144 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 METAP2P50579 478 aaKnown RBP eCLIP27.4■■□□□ 1.982e-6■□□□□ 8.4
CCND3-221ENST00000514588 FGD1P98174 961 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 APOBRQ0VD83 1088 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 PLA2G4DQ86XP0 818 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 PABPC5Q96DU9 382 aaKnown RBP27.4■■□□□ 1.98
CCND3-221ENST00000514588 FTHL17Q9BXU8 183 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 PADI3Q9ULW8 664 aa27.4■■□□□ 1.98
CCND3-221ENST00000514588 IGLV3-22A0A075B6J6 115 aa27.39■■□□□ 1.98
CCND3-221ENST00000514588 CCDC196A0A1B0GTZ2 297 aa27.39■■□□□ 1.98
CCND3-221ENST00000514588 GRXCR2A6NFK2 248 aa27.39■■□□□ 1.98
CCND3-221ENST00000514588 DHX15O43143 795 aaKnown RBP27.39■■□□□ 1.98
CCND3-221ENST00000514588 CYP3A4P08684 503 aa27.39■■□□□ 1.98
CCND3-221ENST00000514588 Q6ZUG5 572 aa27.39■■□□□ 1.98
CCND3-221ENST00000514588 NME8Q8N427 588 aa27.39■■□□□ 1.98
CCND3-221ENST00000514588 LMAN2LQ9H0V9 348 aa27.39■■□□□ 1.98
CCND3-221ENST00000514588 KDM3AQ9Y4C1 1321 aa27.39■■□□□ 1.97
CCND3-221ENST00000514588 ESYT2A0FGR8 921 aa27.38■■□□□ 1.97
CCND3-221ENST00000514588 BACH1O14867 736 aa27.38■■□□□ 1.97
CCND3-221ENST00000514588 KRT76Q01546 638 aa27.38■■□□□ 1.97
CCND3-221ENST00000514588 PAK2Q13177 524 aa27.38■■□□□ 1.97
CCND3-221ENST00000514588 FAM160B1Q5W0V3 765 aa27.38■■□□□ 1.97
CCND3-221ENST00000514588 CCDC60Q8IWA6 550 aaPredicted RBP27.38■■□□□ 1.97
CCND3-221ENST00000514588 ATP8B4Q8TF62 1192 aa27.38■■□□□ 1.97
CCND3-221ENST00000514588 BRF1Q92994 677 aa27.38■■□□□ 1.97
CCND3-221ENST00000514588 JAKMIP1Q96N16 626 aaKnown RBP27.38■■□□□ 1.97
CCND3-221ENST00000514588 UIMC1Q96RL1 719 aa27.38■■□□□ 1.97
CCND3-221ENST00000514588 ZMYND12Q9H0C1 365 aa27.38■■□□□ 1.97
CCND3-221ENST00000514588 HBP1O60381 514 aa27.37■■□□□ 1.97
CCND3-221ENST00000514588 KLRC1P26715 233 aa27.37■■□□□ 1.97
CCND3-221ENST00000514588 PKN1Q16512 942 aa27.37■■□□□ 1.97
CCND3-221ENST00000514588 PUS10Q3MIT2 529 aaKnown RBP27.37■■□□□ 1.97
CCND3-221ENST00000514588 NPAS4Q8IUM7 802 aa27.37■■□□□ 1.97
CCND3-221ENST00000514588 LRFN3Q9BTN0 628 aa27.37■■□□□ 1.97
CCND3-221ENST00000514588 SNX14Q9Y5W7 946 aa27.37■■□□□ 1.97
CCND3-221ENST00000514588 MRPL42Q9Y6G3 142 aaKnown RBP27.37■■□□□ 1.97
CCND3-221ENST00000514588 NID2Q14112 1375 aa27.36■■□□□ 1.97
CCND3-221ENST00000514588 IPO5O00410 1097 aaKnown RBP27.36■■□□□ 1.97
CCND3-221ENST00000514588 EP400NLQ6ZTU2 488 aa27.36■■□□□ 1.97
CCND3-221ENST00000514588 CMTR2Q8IYT2 770 aaKnown RBP27.36■■□□□ 1.97
CCND3-221ENST00000514588 GJD3Q8N144 294 aa27.36■■□□□ 1.97
CCND3-221ENST00000514588 TMX1Q9H3N1 280 aa27.36■■□□□ 1.97
CCND3-221ENST00000514588 C6orf50Q9HD87 102 aa27.36■■□□□ 1.97
CCND3-221ENST00000514588 ZNF302Q9NR11 478 aa27.36■■□□□ 1.97
CCND3-221ENST00000514588 ZBTB42B2RXF5 422 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 HSPA4P34932 840 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 TMEM266Q2M3C6 531 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 MCTP2Q6DN12 878 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 SWSAP1Q6NVH7 229 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 MIS18BP1Q6P0N0 1132 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 PDXDC2PQ6P474 469 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 BLOC1S2Q6QNY1 142 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 KIAA0319LQ8IZA0 1049 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 REXO1Q8N1G1 1221 aaKnown RBP27.35■■□□□ 1.97
CCND3-221ENST00000514588 PLVAPQ9BX97 442 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 CLDND1Q9NY35 253 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 COL1A2P08123 1366 aa27.35■■□□□ 1.97
CCND3-221ENST00000514588 ATG2AQ2TAZ0 1938 aa27.34■■□□□ 1.97
CCND3-221ENST00000514588 PI4K2BG5E9Z4 385 aa27.34■■□□□ 1.97
CCND3-221ENST00000514588 PRPF3O43395 683 aaKnown RBP27.34■■□□□ 1.97
CCND3-221ENST00000514588 ATP4AP20648 1035 aa27.34■■□□□ 1.97
CCND3-221ENST00000514588 ZNF484Q5JVG2 852 aa27.34■■□□□ 1.97
CCND3-221ENST00000514588 TMEM31Q5JXX7 168 aa27.34■■□□□ 1.97
CCND3-221ENST00000514588 CCDC12Q8WUD4 166 aaPredicted RBP27.34■■□□□ 1.97
CCND3-221ENST00000514588 ZNF577Q9BSK1 485 aa27.34■■□□□ 1.97
CCND3-221ENST00000514588 CDHR5Q9HBB8 845 aa27.34■■□□□ 1.97
CCND3-221ENST00000514588 C11orf16Q9NQ32 467 aa27.34■■□□□ 1.97
CCND3-221ENST00000514588 NCK2O43639 380 aa27.33■■□□□ 1.97
CCND3-221ENST00000514588 MMP1P03956 469 aa27.33■■□□□ 1.97
CCND3-221ENST00000514588 STAG3L1P0CL83 205 aa27.33■■□□□ 1.97
CCND3-221ENST00000514588 LTBRP36941 435 aa27.33■■□□□ 1.97
CCND3-221ENST00000514588 CTC1Q2NKJ3 1217 aa27.33■■□□□ 1.97
CCND3-221ENST00000514588 FBXL16Q8N461 479 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms