RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 IRF5Q13568 498 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 LAMC2Q13753 1193 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 XKR9Q5GH70 373 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 XKR3Q5GH77 459 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 CELF3Q5SZQ8 465 aaKnown RBP17.75■□□□□ 0.43
NUP54-214ENST00000514307 IQSEC1Q6DN90 963 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 FOXR2Q6PJQ5 311 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 MYOCDQ8IZQ8 938 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 TSG101Q99816 390 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 TINF2Q9BSI4 451 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 ABHD16BQ9H3Z7 469 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 AZI2Q9H6S1 392 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 ZNF302Q9NR11 478 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 GDAQ9Y2T3 454 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 NFE2L3Q9Y4A8 694 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 TRPM7Q96QT4 1865 aa17.75■□□□□ 0.43
NUP54-214ENST00000514307 SYNGAP1Q96PV0 1343 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 RBM47A0AV96 593 aaKnown RBP17.74■□□□□ 0.43
NUP54-214ENST00000514307 FRMD3A2A2Y4 597 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 RASSF10A6NK89 507 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 GOLGA6L6A8MZA4 724 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 NOP56O00567 594 aaKnown RBP17.74■□□□□ 0.43
NUP54-214ENST00000514307 SERPINC1P01008 464 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 UBA1P22314 1058 aaKnown RBP17.74■□□□□ 0.43
NUP54-214ENST00000514307 SPAG1Q07617 926 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 EHHADHQ08426 723 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 LY6KQ17RY6 165 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 MORN1Q5T089 497 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 CYP4F22Q6NT55 531 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 CCDC62Q6P9F0 684 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.74■□□□□ 0.43
NUP54-214ENST00000514307 EXOC8Q8IYI6 725 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 SMYD4Q8IYR2 804 aaPredicted RBP17.74■□□□□ 0.43
NUP54-214ENST00000514307 MYCT1Q8N699 235 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 P2RX5Q93086 422 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 TRIM44Q96DX7 344 aaPredicted RBP17.74■□□□□ 0.43
NUP54-214ENST00000514307 MAML3Q96JK9 1138 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 PDLIM2Q96JY6 352 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 CTAGE1Q96RT6 745 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.74■□□□□ 0.43
NUP54-214ENST00000514307 CTNND2Q9UQB3 1225 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 MAPK8IP1Q9UQF2 711 aa17.74■□□□□ 0.43
NUP54-214ENST00000514307 MAFBQ9Y5Q3 323 aaPredicted RBP17.74■□□□□ 0.43
NUP54-214ENST00000514307 NPHP3-ACAD11A0A0J9YXS1 232 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 ZBTB39O15060 712 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 FARP2O94887 1054 aaPredicted RBP17.73■□□□□ 0.43
NUP54-214ENST00000514307 HOXC6P09630 235 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 RGS2P41220 211 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 STAT5BP51692 787 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 ZNF75DP51815 510 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 STX17P56962 302 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 SP4Q02446 784 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 CRHR2Q13324 411 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 DRC7Q8IY82 874 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 SLC17A8Q8NDX2 589 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 SOCS4Q8WXH5 440 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 MRFAP1L1Q96HT8 127 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 CAPNS2Q96L46 248 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 REEP2Q9BRK0 252 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 RUSC1Q9BVN2 902 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 PARVGQ9HBI0 331 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 LARSQ9P2J5 1176 aaKnown RBP17.73■□□□□ 0.43
NUP54-214ENST00000514307 WRAP73Q9P2S5 460 aaPredicted RBP17.73■□□□□ 0.43
NUP54-214ENST00000514307 PPME1Q9Y570 386 aa17.73■□□□□ 0.43
NUP54-214ENST00000514307 SYNRGQ9UMZ2 1314 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 IGKV6D-21A0A0A0MT36 114 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 GSTTP1A0A1W2PQM5 241 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 TNPO2O14787 897 aaKnown RBP17.72■□□□□ 0.43
NUP54-214ENST00000514307 NKRFO15226 690 aaKnown RBP eCLIP17.72■□□□□ 0.43
NUP54-214ENST00000514307 GH1P01241 217 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 RARRES1P49788 294 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 SLC26A2P50443 739 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 FANCCQ00597 558 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 LRRC63Q05C16 580 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 RAD51AP2Q09MP3 1159 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 KIF22Q14807 665 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 FILIP1LQ4L180 1135 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 CENPPQ6IPU0 288 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 FAM114A1Q8IWE2 563 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 FAM167AQ96KS9 214 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 CEP170P1Q96L14 293 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 DRC1Q96MC2 740 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 SPATA33Q96N06 139 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 THAP9Q9H5L6 903 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 BCAS3Q9H6U6 928 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 OLFML3Q9NRN5 406 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
NUP54-214ENST00000514307 PCDHB13Q9Y5F0 798 aa17.72■□□□□ 0.43
NUP54-214ENST00000514307 SNAI1O95863 264 aaPredicted RBP17.71■□□□□ 0.43
NUP54-214ENST00000514307 PTMAP06454 111 aaKnown RBP17.71■□□□□ 0.43
NUP54-214ENST00000514307 TPM2P07951 284 aa17.71■□□□□ 0.43
NUP54-214ENST00000514307 MAPTP10636 758 aaKnown RBP17.71■□□□□ 0.43
NUP54-214ENST00000514307 CDC25BP30305 580 aa17.71■□□□□ 0.43
NUP54-214ENST00000514307 MAP2K2P36507 400 aa17.71■□□□□ 0.43
NUP54-214ENST00000514307 FCGRTP55899 365 aa17.71■□□□□ 0.43
NUP54-214ENST00000514307 UBASH3AP57075 661 aa17.71■□□□□ 0.43
NUP54-214ENST00000514307 ACVR2BQ13705 512 aa17.71■□□□□ 0.43
NUP54-214ENST00000514307 TAPT1Q6NXT6 567 aa17.71■□□□□ 0.43
NUP54-214ENST00000514307 PLPPR4Q7Z2D5 763 aa17.71■□□□□ 0.43
NUP54-214ENST00000514307 AFAP1L1Q8TED9 768 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms