RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 TRMT2BQ96GJ1 504 aaKnown RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 SAMD11Q96NU1 681 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 GORASP1Q9BQQ3 440 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 GBP3Q9H0R5 595 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 GOLGA6AQ9NYA3 693 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 C9orf78Q9NZ63 289 aaPredicted RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 PUF60Q9UHX1 559 aaKnown RBP5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 INVSQ9Y283 1065 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 BACE2Q9Y5Z0 518 aa5.26□□□□□ -1.57
SMARCA5-202ENST00000508573 C7orf72A4D263 438 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 MATN3O15232 486 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 PDE8AO60658 829 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 EYA4O95677 639 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 PLATP00750 562 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 RBP3P10745 1247 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 SOX5P35711 763 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 PPM1FP49593 454 aaPredicted RBP5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 GPSM2P81274 684 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 MTMR1Q13613 665 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 GFOD2Q3B7J2 385 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 TNNI3KQ59H18 835 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 WWC2Q6AWC2 1192 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 PDXDC1Q6P996 788 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 CD300LDQ6UXZ3 194 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 SLC16A11Q8NCK7 471 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 TIFAQ96CG3 184 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 SMAD5Q99717 465 aaKnown RBP5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 C11orf84Q9BUA3 381 aaPredicted RBP5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 KLHL25Q9H0H3 589 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 CCDC8Q9H0W5 538 aaPredicted RBP5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 OBP2AQ9NY56 170 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 USP25Q9UHP3 1055 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 ASAP1Q9ULH1 1129 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 GTF2A1LQ9UNN4 478 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 SLC45A1Q9Y2W3 748 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 IPPQ9Y573 584 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 KAT6BQ8WYB5 2073 aa5.25□□□□□ -1.57
SMARCA5-202ENST00000508573 BICDL2A1A5D9 508 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 MROH6A6NGR9 719 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 GSG1L2A8MUP6 293 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 EPHX1P07099 455 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 C8BP07358 591 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 ZNF20P17024 532 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 SLC7A5Q01650 507 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 TOMM20Q15388 145 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 STRA8Q7Z7C7 330 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 FAM124AQ86V42 546 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 LGI4Q8N135 537 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 ARHGEF39Q8N4T4 335 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 FAM26EQ8N5C1 309 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 PJA1Q8NG27 643 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 ATXN2LQ8WWM7 1075 aaKnown RBP5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 GPR101Q96P66 508 aaPredicted RBP5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 STRBPQ96SI9 672 aaKnown RBP5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 SELENOOQ9BVL4 669 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 ALDH8A1Q9H2A2 487 aaPredicted RBP5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 AASDHPPTQ9NRN7 309 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 HDAC9Q9UKV0 1011 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 SLC12A7Q9Y666 1083 aa5.24□□□□□ -1.57
SMARCA5-202ENST00000508573 CLSPNQ9HAW4 1339 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 VSTM5A8MXK1 200 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 DDX3XO00571 662 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 RPL13P26373 211 aaKnown RBP5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 HYIQ5T013 277 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 LVRNQ6Q4G3 990 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 GLB1LQ6UWU2 654 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 ETV3LQ6ZN32 361 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 LHFPL2Q6ZUX7 228 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 LIMS2Q7Z4I7 341 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 KRT77Q7Z794 578 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 CLASRPQ8N2M8 674 aaKnown RBP5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 ENAHQ8N8S7 591 aaPredicted RBP5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 KYQ8NBH2 561 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 PPHLN1Q8NEY8 458 aaKnown RBP5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 SNRNP27Q8WVK2 155 aaKnown RBP5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 MPP4Q96JB8 637 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 TSPAN18Q96SJ8 248 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 HERPUD2Q9BSE4 406 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 YIPF4Q9BSR8 244 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 SARGQ9BW04 601 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 PCDH18Q9HCL0 1135 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 GPRC5CQ9NQ84 441 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 BTG4Q9NY30 223 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 ACTR10Q9NZ32 417 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 MARCH2Q9P0N8 246 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 CLEC1BQ9P126 229 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 CGGBP1Q9UFW8 167 aaPredicted RBP5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 SRRDQ9UH36 339 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 ST6GALNAC2Q9UJ37 374 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 ZNF180Q9UJW8 692 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 NUB1Q9Y5A7 615 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 PHLDB1Q86UU1 1377 aa5.23□□□□□ -1.57
SMARCA5-202ENST00000508573 TRBV23OR9-2A0A075B6M9 112 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 E2F8A0AVK6 867 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 RASSF10A6NK89 507 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 hCG_1984214I3L0E3 225 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 NBNO60934 754 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 NBPF7P0C2Y1 421 aaPredicted RBP5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 TGFB3P10600 412 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms