RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 ZNF543Q08ER8 600 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 SPP2Q13103 211 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 GRB10Q13322 594 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 IFIT1BQ5T764 474 aaKnown RBP6.67□□□□□ -1.34
SCLT1-207ENST00000506233 BTNL9Q6UXG8 535 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 LRRC8AQ8IWT6 810 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 ADGRF4Q8IZF3 695 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 THAP3Q8WTV1 239 aaPredicted RBP6.67□□□□□ -1.34
SCLT1-207ENST00000506233 RELTQ969Z4 430 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 KCNMB3Q9NPA1 279 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 CFAP45Q9UL16 551 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 STRIP2Q9ULQ0 834 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 PCDHA4Q9UN74 947 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 SCAF8Q9UPN6 1271 aaKnown RBP6.67□□□□□ -1.34
SCLT1-207ENST00000506233 MYL1P05976 194 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 MIIPQ5JXC2 388 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 HYIQ5T013 277 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 ZNF804AQ7Z570 1209 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 REXO1L1PQ8IX06 675 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 SMYD4Q8IYR2 804 aaPredicted RBP6.67□□□□□ -1.34
SCLT1-207ENST00000506233 ZNF784Q8NCA9 323 aaPredicted RBP6.67□□□□□ -1.34
SCLT1-207ENST00000506233 KIAA0895Q8NCT3 520 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 PHC3Q8NDX5 983 aa6.67□□□□□ -1.34
SCLT1-207ENST00000506233 R3HCC1Q9Y3T6 440 aaKnown RBP6.67□□□□□ -1.34
SCLT1-207ENST00000506233 CYP3A7-CYP3A51PA0A087WV96 503 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 PF4P02776 101 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 APPP05067 770 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 DPEP1P16444 411 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 CD53P19397 219 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 CYP3A7P24462 503 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 ST5P78524 1137 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 SIM2Q14190 667 aaPredicted RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 BRD3Q15059 726 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 C11orf91Q3C1V1 193 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 ZCWPW2Q504Y3 356 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 INO80DQ53TQ3 878 aaPredicted RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 NIM1KQ8IY84 436 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 TC2NQ8N9U0 490 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 REPS2Q8NFH8 660 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 SVIPQ8NHG7 77 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 PIGSQ96S52 555 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 CHRDQ9H2X0 955 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 KCNH3Q9ULD8 1083 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 REXO2Q9Y3B8 237 aaKnown RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 MYH11P35749 1972 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 ESYT2A0FGR8 921 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 FRMD3A2A2Y4 597 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 IKBKBO14920 756 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 CTIFO43310 598 aaKnown RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 IL2RAP01589 272 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 CELA3AP09093 270 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 ECE1P42892 770 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 TMEM119Q4V9L6 283 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 RRP12Q5JTH9 1297 aaKnown RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 DLK2Q6UY11 383 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 RUFY4Q6ZNE9 571 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 DNAJC19Q96DA6 116 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 CRNKL1Q9BZJ0 848 aaKnown RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 ARHGEF10LQ9HCE6 1279 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 ZMYM5Q9UJ78 669 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 VAV3Q9UKW4 847 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 VPS9D1Q9Y2B5 631 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 COL4A4P53420 1690 aaPredicted RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 ZMYM2Q9UBW7 1377 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 PSMD14O00487 310 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 TEX33O43247 280 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 ITGBL1O95965 494 aaPredicted RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 HIRAP54198 1017 aaPredicted RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 ZNF280AP59817 542 aaPredicted RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 MOGSQ13724 837 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 PPP2R5BQ15173 497 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 COBLL1Q53SF7 1204 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 AMOTL1Q8IY63 956 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 EYA3Q99504 573 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 TNMDQ9H2S6 317 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 SAMSN1Q9NSI8 373 aaKnown RBP6.66□□□□□ -1.34
SCLT1-207ENST00000506233 COL20A1Q9P218 1284 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 PCDHB3Q9Y5E6 796 aa6.66□□□□□ -1.34
SCLT1-207ENST00000506233 BHMG1C9JSJ3 638 aaPredicted RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 EREGO14944 169 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 POLR2DO15514 142 aaKnown RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 EYA4O95677 639 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 SPATA31C1P0DKV0 1188 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 SEZ6Q53EL9 994 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 WDR78Q5VTH9 848 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 SLC30A10Q6XR72 485 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 GMCL1P1Q8NEA9 526 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 TBC1D5Q92609 795 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 RBM28Q9NW13 759 aaKnown RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 ACTR10Q9NZ32 417 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 DAAM1Q9Y4D1 1078 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 WDFY3Q8IZQ1 3526 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 A0A1B0GTH6 734 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 PSDA5PKW4 1024 aaPredicted RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 LETM1O95202 739 aaPredicted RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 VARSP26640 1264 aaKnown RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 TRAPPC10P48553 1259 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 MEX3CQ5U5Q3 659 aaKnown RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 IL31Q6EBC2 164 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 ISM2Q6H9L7 571 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms