RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 MTRQ99707 1265 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 CSRNP2Q9H175 543 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 CUEDC2Q9H467 287 aa9.32□□□□□ -0.92
CDC42SE2-208ENST00000505065 COBLL1Q53SF7 1204 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZNF484Q5JVG2 852 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 FIZ1Q96SL8 496 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 TIPINQ9BVW5 301 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 PRO3102Q9H379 93 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 FOXD4L1Q9NU39 408 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 USP25Q9UHP3 1055 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 OATP04181 439 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 RPLP2P05387 115 aaKnown RBP9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 MAPK7Q13164 816 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 MFSD10Q14728 455 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 GPNMBQ14956 572 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 NT5DC1Q5TFE4 455 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 WDR78Q5VTH9 848 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 FERMT3Q86UX7 667 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 FAM167AQ96KS9 214 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 TIGD1Q96MW7 591 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 RNPEPQ9H4A4 650 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 ERAP1Q9NZ08 941 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 TBX21Q9UL17 535 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 PCDHA2Q9Y5H9 948 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 SQORQ9Y6N5 450 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 NRCAMQ92823 1304 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 A0A0U1RQG5 324 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 ARVCFO00192 962 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 KIAA0355O15063 1070 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 MAFO75444 373 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 QARSP47897 775 aaKnown RBP9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 FMR1NBQ8N0W7 255 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 CRIPAKQ8N1N5 446 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 SYT2Q8N9I0 419 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 STK17AQ9UEE5 414 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZMYM2Q9UBW7 1377 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 POTEMA6NI47 508 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 GAS2O43903 313 aaKnown RBP9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZEB2O60315 1214 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 GUCY2CP25092 1073 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 KRT85P78386 507 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 ARSHQ5FYA8 562 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 CDCA2Q69YH5 1023 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 DTHD1Q6ZMT9 781 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 C1orf186Q6ZWK4 172 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 KCNK18Q7Z418 384 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 GOLPH3LQ9H4A5 285 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 ST6GALNAC4Q9H4F1 302 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZNF302Q9NR11 478 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 LMBRD1Q9NUN5 540 aa9.31□□□□□ -0.92
CDC42SE2-208ENST00000505065 ARL2P36404 184 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZFP91Q96JP5 570 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 DEFB118Q96PH6 123 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 SMIM35A0A1B0GVV1 85 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 EYA4O95677 639 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 FOSBP53539 338 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 XKR3Q5GH77 459 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 HBP1O60381 514 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 PGK1P00558 417 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 CXCL10P02778 98 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 SMIM10L2AP0DMW4 78 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 SMIM10L2BP0DMW5 78 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 RARRES1P49788 294 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 PTK7Q13308 1070 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 FAM160B1Q5W0V3 765 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 USP49Q70CQ1 688 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 EEPD1Q7L9B9 569 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 LXNQ9BS40 222 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 NTPCRQ9BSD7 190 aaKnown RBP9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 AP5M1Q9H0R1 490 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 C11orf49Q9H6J7 331 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZSWIM4Q9H7M6 989 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 XPNPEP1Q9NQW7 623 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 MROH7Q68CQ1 1323 aa9.3□□□□□ -0.92
CDC42SE2-208ENST00000505065 H3BRB1 525 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 DYNC1LI2O43237 492 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 DKC1O60832 514 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 SCP2P22307 547 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 RFC5P40937 340 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 TECP42680 631 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 DNAJC19Q96DA6 116 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 DYDC2Q96IM9 177 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 CCDC113Q9H0I3 377 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 RNF208Q9H0X6 261 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 ADAMTS10Q9H324 1103 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 TUT1Q9H6E5 874 aaKnown RBP9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 RRN3P2A6NIE6 340 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 GPR32O75388 356 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 STAT5BP51692 787 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 BEX3Q00994 111 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 PRKCEQ02156 737 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 DAW1Q8N136 415 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 DIS3LQ8TF46 1054 aaKnown RBP9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 RAD54LQ92698 747 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 SYMPKQ92797 1274 aaKnown RBP9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 CHAMP1Q96JM3 812 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 TDRD15B5MCY1 1934 aaKnown RBP9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 PITPNM1O00562 1244 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 PPP1R37O75864 691 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 MYL1P05976 194 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms