RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 EVI2BP34910 448 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 C20orf194Q5TEA3 1177 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 PLEKHA7Q6IQ23 1121 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 ARHGAP27Q6ZUM4 889 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 KRT73Q86Y46 540 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 SPARTQ8N0X7 666 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 RIN3Q8TB24 985 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 EPS8L3Q8TE67 593 aaKnown RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 QKIQ96PU8 341 aaKnown RBP eCLIP6.71□□□□□ -1.343e-8■■■■■ 39
CLCN3-204ENST00000504131 SLC26A6Q9BXS9 759 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 DPH5Q9H2P9 285 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 TMEM206Q9H813 350 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 KIF17Q9P2E2 1029 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 SOX13Q9UN79 622 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 TTF2Q9UNY4 1162 aaKnown RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 SNX8Q9Y5X2 465 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 MYOM3Q5VTT5 1437 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 SMCO2A6NFE2 343 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 SPDYE3A6NKU9 549 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 KRT86O43790 486 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 FYNP06241 537 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 ITGALP20701 1170 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 ITGAXP20702 1163 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 GDI2P50395 445 aaKnown RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 PTK2BQ14289 1009 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 SMU1Q2TAY7 513 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 C8orf34Q49A92 452 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 FAM83BQ5T0W9 1011 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 PATL1Q86TB9 770 aaKnown RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 IFNL3Q8IZI9 196 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 TTC5Q8N0Z6 440 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 REXO1Q8N1G1 1221 aaKnown RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 VPS39Q96JC1 886 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 FAM192AQ9GZU8 254 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 RMND1Q9NWS8 449 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 PKD2L2Q9NZM6 624 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 EFR3BQ9Y2G0 817 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 IQGAP2Q13576 1575 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 NCAM2O15394 837 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 ATP5BP06576 529 aaKnown RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF445P59923 1031 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 GNG11P61952 73 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 STX5Q13190 355 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 NFIL3Q16649 462 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 POMZP3Q6PJE2 187 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 TRAF7Q6Q0C0 670 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 SRRM1Q8IYB3 904 aaKnown RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 GRK7Q8WTQ7 553 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF512BQ96KM6 892 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 DDX50Q9BQ39 737 aaKnown RBP6.71□□□□□ -1.34
CLCN3-204ENST00000504131 STX8Q9UNK0 236 aa6.71□□□□□ -1.34
CLCN3-204ENST00000504131 DENND4BO75064 1496 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 RAB19A4D1S5 217 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 A6NCN8 305 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 CCDC69A6NI79 296 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 XPO1O14980 1071 aaKnown RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 TOM1O60784 492 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 DCTN2Q13561 401 aaKnown RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 KRT71Q3SY84 523 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 DGKKQ5KSL6 1271 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ATAD3BQ5T9A4 648 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 GAS2L3Q86XJ1 694 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 VPS52Q8N1B4 723 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 PPP2R3CQ969Q6 453 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 KIFC2Q96AC6 838 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 NDNQ99608 321 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ACAT2Q9BWD1 397 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ABCG8Q9H221 673 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 VPS11Q9H270 941 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 SNX25Q9H3E2 840 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ZCCHC17Q9NP64 241 aaKnown RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 DLGAP2Q9P1A6 1054 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 CIDEBQ9UHD4 219 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF608Q9ULD9 1512 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF335Q9H4Z2 1342 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 SPTLC1O15269 473 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 RIPK2O43353 540 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 KRT9P35527 623 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ETV3P41162 512 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 STX1BP61266 288 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ADAM17P78536 824 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 LRRC74AQ0VAA2 488 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 SGO2Q562F6 1265 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 SPDYAQ5MJ70 313 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 HECTD3Q5T447 861 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF425Q6IV72 752 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 PTF1AQ7RTS3 328 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 GOT1L1Q8NHS2 421 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 CCDC12Q8WUD4 166 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 FAM161BQ96MY7 647 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 PIH1D3Q9NQM4 214 aaKnown RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 DDX18Q9NVP1 670 aaKnown RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 TTC7AQ9ULT0 858 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 NUP160Q12769 1436 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 H0Y626 953 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 DCTN3O75935 186 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 OR5F1O95221 314 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 TRIM16O95361 564 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 TGDSO95455 350 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms