RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 CLK2P49760 499 aaKnown RBP12.56□□□□□ -0.4
LSAMP-206ENST00000498645 PAK2Q13177 524 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 BTG3Q14201 252 aaPredicted RBP12.56□□□□□ -0.4
LSAMP-206ENST00000498645 PFKFB3Q16875 520 aaPredicted RBP12.56□□□□□ -0.4
LSAMP-206ENST00000498645 TMEM266Q2M3C6 531 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 TCEAL5Q5H9L2 206 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 FAM160B1Q5W0V3 765 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 BLOC1S2Q6QNY1 142 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 PLPPR4Q7Z2D5 763 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 TRMT1LQ7Z2T5 733 aaKnown RBP12.56□□□□□ -0.4
LSAMP-206ENST00000498645 PPP1R16BQ96T49 567 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 TCEAL9Q9UHQ7 104 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 PCDHA2Q9Y5H9 948 aa12.56□□□□□ -0.4
LSAMP-206ENST00000498645 WDR81Q562E7 1941 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 ADAMTS3O15072 1205 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 RPLP2P05387 115 aaKnown RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 IL9P15248 144 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 RCAN1P53805 252 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 KRT76Q01546 638 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 AKAP17AQ02040 695 aaKnown RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 LEXMQ3ZCV2 418 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 PAN2Q504Q3 1202 aaKnown RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 PTCRAQ6ISU1 281 aaPredicted RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 PDXDC2PQ6P474 469 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 MTHFD1LQ6UB35 978 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 CCDC60Q8IWA6 550 aaPredicted RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 TEX2Q8IWB9 1127 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 CKAP2LQ8IYA6 745 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 REXO1Q8N1G1 1221 aaKnown RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 CCDC12Q8WUD4 166 aaPredicted RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 LINC01599Q8WXQ3 324 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 PHKBQ93100 1093 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 CCDC136Q96JN2 1154 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 ZNF577Q9BSK1 485 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 C11orf84Q9BUA3 381 aaPredicted RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 C1QTNF1Q9BXJ1 281 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 CELF4Q9BZC1 486 aaKnown RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 NSUN3Q9H649 340 aaKnown RBP12.55□□□□□ -0.4
LSAMP-206ENST00000498645 EPHX3Q9H6B9 360 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 C6orf50Q9HD87 102 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 ZNF302Q9NR11 478 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 SNX14Q9Y5W7 946 aa12.55□□□□□ -0.4
LSAMP-206ENST00000498645 IPO5O00410 1097 aaKnown RBP12.54□□□□□ -0.4
LSAMP-206ENST00000498645 GRM6O15303 877 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 ATG7O95352 703 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 KLRC1P26715 233 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 SSTR3P32745 418 aaPredicted RBP12.54□□□□□ -0.4
LSAMP-206ENST00000498645 HSPA4P34932 840 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 BMPR1AP36894 532 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 SLC26A2P50443 739 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 NFX1Q12986 1120 aaKnown RBP12.54□□□□□ -0.4
LSAMP-206ENST00000498645 SWSAP1Q6NVH7 229 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 MIS18BP1Q6P0N0 1132 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 ABHD15Q6UXT9 468 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 NIPA1Q7RTP0 329 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.54□□□□□ -0.4
LSAMP-206ENST00000498645 RASGRP4Q8TDF6 673 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 FTHL17Q9BXU8 183 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 RC3H2Q9HBD1 1191 aaKnown RBP12.54□□□□□ -0.4
LSAMP-206ENST00000498645 CLDND1Q9NY35 253 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 LRFN2Q9ULH4 789 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 PADI3Q9ULW8 664 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 RWDD3Q9Y3V2 267 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 SAMM50Q9Y512 469 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 IGSF9BQ9UPX0 1349 aa12.54□□□□□ -0.4
LSAMP-206ENST00000498645 IGLV3-22A0A075B6J6 115 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 SMIM35A0A1B0GVV1 85 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 C5orf67F2Z3F1 127 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 HBP1O60381 514 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 DGKIO75912 1065 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 LINC00271P0C7V0 271 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 STAG3L1P0CL83 205 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 RPS6KB1P23443 525 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 GATMP50440 423 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
LSAMP-206ENST00000498645 PKN1Q16512 942 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 PRR16Q569H4 304 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 RTN4RL1Q86UN2 441 aaPredicted RBP12.53□□□□□ -0.4
LSAMP-206ENST00000498645 NPAS4Q8IUM7 802 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 NME8Q8N427 588 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 ATP8B4Q8TF62 1192 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 KHSRPQ92945 711 aaKnown RBP eCLIP12.53□□□□□ -0.4
LSAMP-206ENST00000498645 ZNF689Q96CS4 500 aaPredicted RBP12.53□□□□□ -0.4
LSAMP-206ENST00000498645 ZMYND12Q9H0C1 365 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 IGFLR1Q9H665 355 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 NCOA5Q9HCD5 579 aaKnown RBP12.53□□□□□ -0.4
LSAMP-206ENST00000498645 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
LSAMP-206ENST00000498645 CD320Q9NPF0 282 aa12.53□□□□□ -0.4
LSAMP-206ENST00000498645 MRPL42Q9Y6G3 142 aaKnown RBP12.53□□□□□ -0.4
LSAMP-206ENST00000498645 C5orf42Q9H799 3197 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 IGKV6D-21A0A0A0MT36 114 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 ESYT2A0FGR8 921 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 DHX15O43143 795 aaKnown RBP12.52□□□□□ -0.41
LSAMP-206ENST00000498645 PRPF3O43395 683 aaKnown RBP12.52□□□□□ -0.41
LSAMP-206ENST00000498645 RB1P06400 928 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 CYP3A4P08684 503 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 GNA11P29992 359 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms