RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 COL19A1Q14993 1142 aa21.14■□□□□ 0.97
PRKCB-209ENST00000498058 JAKMIP3Q5VZ66 844 aa21.14■□□□□ 0.97
PRKCB-209ENST00000498058 FAM178BQ8IXR5 827 aa21.14■□□□□ 0.97
PRKCB-209ENST00000498058 KCNB2Q92953 911 aa21.14■□□□□ 0.97
PRKCB-209ENST00000498058 AZI2Q9H6S1 392 aa21.14■□□□□ 0.97
PRKCB-209ENST00000498058 TRPV2Q9Y5S1 764 aa21.14■□□□□ 0.97
PRKCB-209ENST00000498058 IGLV3-22A0A075B6J6 115 aa21.13■□□□□ 0.97
PRKCB-209ENST00000498058 DGKIO75912 1065 aa21.13■□□□□ 0.97
PRKCB-209ENST00000498058 TIGD5Q53EQ6 642 aa21.13■□□□□ 0.97
PRKCB-209ENST00000498058 PTCRAQ6ISU1 281 aaPredicted RBP21.13■□□□□ 0.97
PRKCB-209ENST00000498058 MTHFD1LQ6UB35 978 aa21.13■□□□□ 0.97
PRKCB-209ENST00000498058 ABHD15Q6UXT9 468 aa21.13■□□□□ 0.97
PRKCB-209ENST00000498058 CLP1Q92989 425 aaKnown RBP21.13■□□□□ 0.97
PRKCB-209ENST00000498058 LRFN3Q9BTN0 628 aa21.13■□□□□ 0.97
PRKCB-209ENST00000498058 C1QTNF1Q9BXJ1 281 aa21.13■□□□□ 0.97
PRKCB-209ENST00000498058 TMX1Q9H3N1 280 aa21.13■□□□□ 0.97
PRKCB-209ENST00000498058 POTEB3A0JP26 581 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 GRXCR2A6NFK2 248 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 hCG_1984214I3L0E3 225 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 ATP4AP20648 1035 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 AP3B2Q13367 1082 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 PKN1Q16512 942 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 PFKFB3Q16875 520 aaPredicted RBP21.12■□□□□ 0.97
PRKCB-209ENST00000498058 POTEBQ6S5H4 581 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 Q6ZUG5 572 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 CCDC60Q8IWA6 550 aaPredicted RBP21.12■□□□□ 0.97
PRKCB-209ENST00000498058 ZNF713Q8N859 430 aaPredicted RBP21.12■□□□□ 0.97
PRKCB-209ENST00000498058 CELF4Q9BZC1 486 aaKnown RBP21.12■□□□□ 0.97
PRKCB-209ENST00000498058 NSUN3Q9H649 340 aaKnown RBP21.12■□□□□ 0.97
PRKCB-209ENST00000498058 CDHR5Q9HBB8 845 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 PADI3Q9ULW8 664 aa21.12■□□□□ 0.97
PRKCB-209ENST00000498058 IGSF9BQ9UPX0 1349 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 RB1P06400 928 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 LTBRP36941 435 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 GATMP50440 423 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 CAMK1Q14012 370 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 BTG3Q14201 252 aaPredicted RBP21.11■□□□□ 0.97
PRKCB-209ENST00000498058 TMEM266Q2M3C6 531 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 IER5Q5VY09 327 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 NIPA1Q7RTP0 329 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 PLA2G4DQ86XP0 818 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 TEX2Q8IWB9 1127 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 PABPC5Q96DU9 382 aaKnown RBP21.11■□□□□ 0.97
PRKCB-209ENST00000498058 NAP1L2Q9ULW6 460 aaPredicted RBP21.11■□□□□ 0.97
PRKCB-209ENST00000498058 MRPL42Q9Y6G3 142 aaKnown RBP21.11■□□□□ 0.97
PRKCB-209ENST00000498058 SQORQ9Y6N5 450 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 WDR81Q562E7 1941 aa21.11■□□□□ 0.97
PRKCB-209ENST00000498058 SMIM35A0A1B0GVV1 85 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 FAM86C2PA6NEL3 165 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 ZBTB42B2RXF5 422 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 EDIL3O43854 480 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 PPFIA3O75145 1194 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 CYP3A4P08684 503 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 SCG2P13521 617 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 KLRC1P26715 233 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 GTF2F1P35269 517 aaKnown RBP eCLIP21.1■□□□□ 0.971e-9■■■■□ 20
PRKCB-209ENST00000498058 RCAN1P53805 252 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 KRT32Q14532 448 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 BRF1Q92994 677 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 SNX14Q9Y5W7 946 aa21.1■□□□□ 0.97
PRKCB-209ENST00000498058 KDM3AQ9Y4C1 1321 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 MYH9P35579 1960 aaKnown RBP21.09■□□□□ 0.97
PRKCB-209ENST00000498058 PI4K2BG5E9Z4 385 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 MGEA5O60502 916 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 CSPG5O95196 566 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 DNAJB1P25685 340 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 ZNF76P36508 570 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 METAP2P50579 478 aaKnown RBP eCLIP21.09■□□□□ 0.97
PRKCB-209ENST00000498058 DLX2Q07687 328 aaPredicted RBP21.09■□□□□ 0.97
PRKCB-209ENST00000498058 HYAL1Q12794 435 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 KIAA0319LQ8IZA0 1049 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 GJD3Q8N144 294 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 TMEM40Q8WWA1 233 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 JAKMIP1Q96N16 626 aaKnown RBP21.09■□□□□ 0.97
PRKCB-209ENST00000498058 ZMYND12Q9H0C1 365 aa21.09■□□□□ 0.97
PRKCB-209ENST00000498058 ALG13Q9NP73 1137 aaKnown RBP21.09■□□□□ 0.97
PRKCB-209ENST00000498058 HSPA4P34932 840 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 KRT76Q01546 638 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 CTC1Q2NKJ3 1217 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 PAN2Q504Q3 1202 aaKnown RBP21.08■□□□□ 0.97
PRKCB-209ENST00000498058 SWSAP1Q6NVH7 229 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 EP400NLQ6ZTU2 488 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 RASGRP4Q8TDF6 673 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 ATP8B4Q8TF62 1192 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 PHKBQ93100 1093 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 C11orf84Q9BUA3 381 aaPredicted RBP21.08■□□□□ 0.97
PRKCB-209ENST00000498058 ERVK-5Q9HDB9 667 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 CLDND1Q9NY35 253 aa21.08■□□□□ 0.97
PRKCB-209ENST00000498058 NOC2LQ9Y3T9 749 aaKnown RBP21.08■□□□□ 0.97
PRKCB-209ENST00000498058 NID2Q14112 1375 aa21.08■□□□□ 0.96
PRKCB-209ENST00000498058 FNDC1Q4ZHG4 1894 aaPredicted RBP21.07■□□□□ 0.96
PRKCB-209ENST00000498058 PLXNA4Q9HCM2 1894 aa21.07■□□□□ 0.96
PRKCB-209ENST00000498058 C5orf42Q9H799 3197 aa21.07■□□□□ 0.96
PRKCB-209ENST00000498058 ESYT2A0FGR8 921 aa21.07■□□□□ 0.96
PRKCB-209ENST00000498058 IPO5O00410 1097 aaKnown RBP21.07■□□□□ 0.96
PRKCB-209ENST00000498058 BACH1O14867 736 aa21.07■□□□□ 0.96
PRKCB-209ENST00000498058 HBP1O60381 514 aa21.07■□□□□ 0.96
PRKCB-209ENST00000498058 RPLP2P05387 115 aaKnown RBP21.07■□□□□ 0.96
PRKCB-209ENST00000498058 HMGB1P09429 215 aaKnown RBP21.07■□□□□ 0.96
PRKCB-209ENST00000498058 PAK2Q13177 524 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms