RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CDH19Q9H159 772 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 HSPBP1Q9NZL4 362 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.2□□□□□ -1.26
SSR3-208ENST00000496050 MMEP08473 750 aa7.2□□□□□ -1.26
SSR3-208ENST00000496050 CT47B1P0C2W7 299 aaPredicted RBP7.2□□□□□ -1.26
SSR3-208ENST00000496050 ZSCAN20P17040 1043 aaPredicted RBP7.2□□□□□ -1.26
SSR3-208ENST00000496050 RECQLP46063 649 aaPredicted RBP7.2□□□□□ -1.26
SSR3-208ENST00000496050 YBX1P67809 324 aaKnown RBP7.2□□□□□ -1.26
SSR3-208ENST00000496050 KRT85P78386 507 aa7.2□□□□□ -1.26
SSR3-208ENST00000496050 DBPQ10586 325 aaPredicted RBP7.2□□□□□ -1.26
SSR3-208ENST00000496050 PDCD1Q15116 288 aa7.2□□□□□ -1.26
SSR3-208ENST00000496050 PCBP2Q15366 365 aaKnown RBP eCLIP7.2□□□□□ -1.26
SSR3-208ENST00000496050 IRF2BP1Q8IU81 584 aa7.2□□□□□ -1.26
SSR3-208ENST00000496050 PHYKPLQ8IUZ5 450 aa7.2□□□□□ -1.26
SSR3-208ENST00000496050 FAM126BQ8IXS8 530 aa7.2□□□□□ -1.26
SSR3-208ENST00000496050 CMIPQ8IY22 773 aa7.2□□□□□ -1.26
SSR3-208ENST00000496050 ASB15Q8WXK1 588 aa7.2□□□□□ -1.26
SSR3-208ENST00000496050 LUC7LQ9NQ29 371 aaKnown RBP7.2□□□□□ -1.26
SSR3-208ENST00000496050 DTLQ9NZJ0 730 aa7.2□□□□□ -1.26
SSR3-208ENST00000496050 LUC7L2Q9Y383 392 aaKnown RBP7.2□□□□□ -1.26
SSR3-208ENST00000496050 UBA6A0AVT1 1052 aaPredicted RBP7.19□□□□□ -1.26
SSR3-208ENST00000496050 KLHL33A6NCF5 533 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 TRIM75PA6NK02 468 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 RASSF10A6NK89 507 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 KIF3BO15066 747 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 LRG1P02750 347 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 GLI1P08151 1106 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 GPR3P46089 330 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 NKX3-2P78367 333 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 TTC38Q5R3I4 469 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 ETV3LQ6ZN32 361 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 TTLL7Q6ZT98 887 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 AMIGO3Q86WK7 504 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 MIB1Q86YT6 1006 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 MYO1HQ8N1T3 1032 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 C7orf31Q8N865 590 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 ALG3Q92685 438 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 TUBGCP5Q96RT8 1024 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 ANO3Q9BYT9 981 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 MS4A5Q9H3V2 200 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 TCF7L1Q9HCS4 588 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 ARHGAP28Q9P2N2 729 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 IP6K2Q9UHH9 426 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 ANKRD6Q9Y2G4 727 aa7.19□□□□□ -1.26
SSR3-208ENST00000496050 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 PRAMEF22A3QJZ6 481 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 RFPL1O75677 317 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 ABLIM3O94929 683 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 SCGB1D2O95969 90 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 ENO2P09104 434 aaPredicted RBP7.18□□□□□ -1.26
SSR3-208ENST00000496050 U2AF1L5P0DN76 240 aaPredicted RBP7.18□□□□□ -1.26
SSR3-208ENST00000496050 U2AF1Q01081 240 aaKnown RBP eCLIP7.18□□□□□ -1.262e-12■■■■□ 19.4
SSR3-208ENST00000496050 LRRC41Q15345 812 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 CLUL1Q15846 466 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 KCNMB1Q16558 191 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 PLEKHN1Q494U1 663 aaPredicted RBP7.18□□□□□ -1.26
SSR3-208ENST00000496050 ARTNQ5T4W7 220 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 PRAMEF18Q5VWM3 479 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 ZC3H18Q86VM9 953 aaKnown RBP7.18□□□□□ -1.26
SSR3-208ENST00000496050 JPH3Q8WXH2 748 aaPredicted RBP7.18□□□□□ -1.26
SSR3-208ENST00000496050 RELTQ969Z4 430 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 MAML3Q96JK9 1138 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 HCFC2Q9Y5Z7 792 aa7.18□□□□□ -1.26
SSR3-208ENST00000496050 LCHNA4D1U4 455 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 GOLGA6CA6NDK9 693 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 GOLGA6BA6NDN3 693 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 HRKO00198 91 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 TMEM253P0C7T8 217 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 GOLGA6DP0CG33 693 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 VCAM1P19320 739 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 AOAHP28039 575 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 FSCN1Q16658 493 aaKnown RBP7.17□□□□□ -1.26
SSR3-208ENST00000496050 UGT8Q16880 541 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 EFCAB2Q5VUJ9 269 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 TEPPQ6URK8 271 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 CILP2Q8IUL8 1156 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 CPA6Q8N4T0 437 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 CALML6Q8TD86 181 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 FOXRED1Q96CU9 486 aaPredicted RBP7.17□□□□□ -1.26
SSR3-208ENST00000496050 ORAI2Q96SN7 254 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 WNT8AQ9H1J5 351 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 BCAS3Q9H6U6 928 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 ZNF552Q9H707 407 aaPredicted RBP7.17□□□□□ -1.26
SSR3-208ENST00000496050 GOLGA6AQ9NYA3 693 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 BTBD7Q9P203 1132 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 GIT1Q9Y2X7 761 aa7.17□□□□□ -1.26
SSR3-208ENST00000496050 MAFGO15525 162 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 XPOTO43592 962 aaKnown RBP7.16□□□□□ -1.26
SSR3-208ENST00000496050 PRPF6O94906 941 aaKnown RBP7.16□□□□□ -1.26
SSR3-208ENST00000496050 NCAM1P13591 858 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 ENPP1P22413 925 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 ROM1Q03395 351 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 ACAP2Q15057 778 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 FAM102BQ5T8I3 360 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 CD276Q5ZPR3 534 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 CD300LDQ6UXZ3 194 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 RTN4RL1Q86UN2 441 aaPredicted RBP7.16□□□□□ -1.26
SSR3-208ENST00000496050 CXorf67Q86X51 503 aaPredicted RBP7.16□□□□□ -1.26
SSR3-208ENST00000496050 ZSWIM9Q86XI8 627 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 TCEAL8Q8IYN2 117 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms