RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 XBP1P17861 261 aa27.45■■□□□ 1.98
HLA-C-209ENST00000495835 MRPS6P82932 125 aaKnown RBP27.45■■□□□ 1.98
HLA-C-209ENST00000495835 SCRN1Q12765 414 aa27.45■■□□□ 1.98
HLA-C-209ENST00000495835 SWSAP1Q6NVH7 229 aa27.45■■□□□ 1.98
HLA-C-209ENST00000495835 PDXDC2PQ6P474 469 aa27.45■■□□□ 1.98
HLA-C-209ENST00000495835 CCDC60Q8IWA6 550 aaPredicted RBP27.45■■□□□ 1.98
HLA-C-209ENST00000495835 MYOCDQ8IZQ8 938 aa27.45■■□□□ 1.98
HLA-C-209ENST00000495835 SIP14410 1827 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 CYP3A7-CYP3A51PA0A087WV96 503 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 M0QZ92 97 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 EDIL3O43854 480 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 CYP3A7P24462 503 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 Q4G0T1 1027 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 FBXO47Q5MNV8 452 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 MTHFD1LQ6UB35 978 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 MOXD1Q6UVY6 613 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 TMCO2Q7Z6W1 182 aaPredicted RBP27.44■■□□□ 1.98
HLA-C-209ENST00000495835 TBCKQ8TEA7 893 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 BBXQ8WY36 941 aaPredicted RBP27.44■■□□□ 1.98
HLA-C-209ENST00000495835 TGS1Q96RS0 853 aaKnown RBP27.44■■□□□ 1.98
HLA-C-209ENST00000495835 OSBPL7Q9BZF2 842 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 LMCD1Q9NZU5 365 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 TPCN1Q9ULQ1 816 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 CDY2AQ9Y6F7 541 aa27.44■■□□□ 1.98
HLA-C-209ENST00000495835 KDM3AQ9Y4C1 1321 aa27.43■■□□□ 1.98
HLA-C-209ENST00000495835 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.43■■□□□ 1.98
HLA-C-209ENST00000495835 LCHNA4D1U4 455 aa27.43■■□□□ 1.98
HLA-C-209ENST00000495835 ARHGEF15O94989 841 aa27.43■■□□□ 1.98
HLA-C-209ENST00000495835 ERVK-21P61565 698 aa27.43■■□□□ 1.98
HLA-C-209ENST00000495835 LPIN1Q14693 890 aa27.43■■□□□ 1.98
HLA-C-209ENST00000495835 TSHZ1Q6ZSZ6 1077 aa27.43■■□□□ 1.98
HLA-C-209ENST00000495835 SP7Q8TDD2 431 aaPredicted RBP27.43■■□□□ 1.98
HLA-C-209ENST00000495835 ARNTL2Q8WYA1 636 aa27.43■■□□□ 1.98
HLA-C-209ENST00000495835 LINC01553A4QN01 128 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 WDR64B1ANS9 1081 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 MSH4O15457 936 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 GHRP10912 638 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 SFNP31947 248 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 KRT25Q7Z3Z0 450 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 SLC5A5Q92911 643 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 TSPYL2Q9H2G4 693 aaPredicted RBP27.42■■□□□ 1.98
HLA-C-209ENST00000495835 CERS4Q9HA82 394 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 TRPV2Q9Y5S1 764 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 MTCH2Q9Y6C9 303 aa27.42■■□□□ 1.98
HLA-C-209ENST00000495835 COL4A6Q14031 1691 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 KLRC1P26715 233 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 AK2P54819 239 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 NPY5RQ15761 445 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 ATXN2LQ8WWM7 1075 aaKnown RBP27.41■■□□□ 1.98
HLA-C-209ENST00000495835 WASF1Q92558 559 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 FAM167AQ96KS9 214 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 SAMD11Q96NU1 681 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 PHF20Q9BVI0 1012 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 FTHL17Q9BXU8 183 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 CEP131Q9UPN4 1083 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 WDR81Q562E7 1941 aa27.41■■□□□ 1.98
HLA-C-209ENST00000495835 ATP4AP20648 1035 aa27.4■■□□□ 1.98
HLA-C-209ENST00000495835 NONOQ15233 471 aaKnown RBP eCLIP27.4■■□□□ 1.98
HLA-C-209ENST00000495835 FAM117BQ6P1L5 589 aa27.4■■□□□ 1.98
HLA-C-209ENST00000495835 RDM1Q8NG50 284 aa27.4■■□□□ 1.98
HLA-C-209ENST00000495835 TRAPPC12Q8WVT3 735 aa27.4■■□□□ 1.98
HLA-C-209ENST00000495835 SYMPKQ92797 1274 aaKnown RBP27.4■■□□□ 1.98
HLA-C-209ENST00000495835 MBOAT7Q96N66 472 aa27.4■■□□□ 1.98
HLA-C-209ENST00000495835 CELF4Q9BZC1 486 aaKnown RBP27.4■■□□□ 1.98
HLA-C-209ENST00000495835 FAM49AQ9H0Q0 323 aaPredicted RBP27.4■■□□□ 1.98
HLA-C-209ENST00000495835 SAMM50Q9Y512 469 aa27.4■■□□□ 1.98
HLA-C-209ENST00000495835 GAS7O60861 476 aa27.39■■□□□ 1.98
HLA-C-209ENST00000495835 JAK3P52333 1124 aa27.39■■□□□ 1.98
HLA-C-209ENST00000495835 CKAP2LQ8IYA6 745 aa27.39■■□□□ 1.98
HLA-C-209ENST00000495835 PPM1EQ8WY54 764 aa27.39■■□□□ 1.98
HLA-C-209ENST00000495835 AIFM3Q96NN9 605 aa27.39■■□□□ 1.98
HLA-C-209ENST00000495835 TEKT3Q9BXF9 490 aa27.39■■□□□ 1.98
HLA-C-209ENST00000495835 DISC1Q9NRI5 854 aa27.39■■□□□ 1.98
HLA-C-209ENST00000495835 REV3LO60673 3130 aa27.39■■□□□ 1.98
HLA-C-209ENST00000495835 VCANP13611 3396 aa27.39■■□□□ 1.98
HLA-C-209ENST00000495835 IGSF9BQ9UPX0 1349 aa27.39■■□□□ 1.97
HLA-C-209ENST00000495835 CUL9Q8IWT3 2517 aa27.38■■□□□ 1.97
HLA-C-209ENST00000495835 EPOPA6NHQ4 379 aa27.38■■□□□ 1.97
HLA-C-209ENST00000495835 RFXAPO00287 272 aa27.38■■□□□ 1.97
HLA-C-209ENST00000495835 ENPP3O14638 875 aa27.38■■□□□ 1.97
HLA-C-209ENST00000495835 LRCH2Q5VUJ6 765 aa27.38■■□□□ 1.97
HLA-C-209ENST00000495835 ZNF710Q8N1W2 664 aa27.38■■□□□ 1.97
HLA-C-209ENST00000495835 YME1L1Q96TA2 773 aa27.38■■□□□ 1.97
HLA-C-209ENST00000495835 THEGQ9P2T0 379 aa27.38■■□□□ 1.97
HLA-C-209ENST00000495835 GABBR1Q9UBS5 961 aa27.38■■□□□ 1.97
HLA-C-209ENST00000495835 ZBTB42B2RXF5 422 aa27.37■■□□□ 1.97
HLA-C-209ENST00000495835 PSMD10O75832 226 aa27.37■■□□□ 1.97
HLA-C-209ENST00000495835 GRB10Q13322 594 aa27.37■■□□□ 1.97
HLA-C-209ENST00000495835 CCDC85BQ15834 202 aaPredicted RBP27.37■■□□□ 1.97
HLA-C-209ENST00000495835 ODR4Q5SWX8 454 aa27.37■■□□□ 1.97
HLA-C-209ENST00000495835 EVPLQ92817 2033 aa27.37■■□□□ 1.97
HLA-C-209ENST00000495835 ZBTB10Q96DT7 871 aa27.37■■□□□ 1.97
HLA-C-209ENST00000495835 UIMC1Q96RL1 719 aa27.37■■□□□ 1.97
HLA-C-209ENST00000495835 COL25A1Q9BXS0 654 aaPredicted RBP27.37■■□□□ 1.97
HLA-C-209ENST00000495835 NRBP2Q9NSY0 501 aa27.37■■□□□ 1.97
HLA-C-209ENST00000495835 LOXHD1Q8IVV2 1947 aa27.37■■□□□ 1.97
HLA-C-209ENST00000495835 MAGEB2O15479 319 aa27.36■■□□□ 1.97
HLA-C-209ENST00000495835 LPXNO60711 386 aa27.36■■□□□ 1.97
HLA-C-209ENST00000495835 KIAA0319LQ8IZA0 1049 aa27.36■■□□□ 1.97
HLA-C-209ENST00000495835 NAP1L4Q99733 375 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms