RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 BRPF3Q9ULD4 1205 aa14.44□□□□□ -0.1
SKA1-205ENST00000494518 NAP1L2Q9ULW6 460 aaPredicted RBP14.44□□□□□ -0.1
SKA1-205ENST00000494518 TRPV2Q9Y5S1 764 aa14.44□□□□□ -0.1
SKA1-205ENST00000494518 PIEZO1Q92508 2521 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 RRN3P2A6NIE6 340 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 STXBP3O00186 592 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 LINC01565O15544 149 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 ZBTB43O43298 467 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 ADCY7P51828 1080 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 HYAL1Q12794 435 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 ADCK5Q3MIX3 580 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 RTN4RL1Q86UN2 441 aaPredicted RBP14.43□□□□□ -0.1
SKA1-205ENST00000494518 ZNF689Q96CS4 500 aaPredicted RBP14.43□□□□□ -0.1
SKA1-205ENST00000494518 NEK1Q96PY6 1258 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 PPP1R16BQ96T49 567 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 AGO4Q9HCK5 861 aaKnown RBP14.43□□□□□ -0.1
SKA1-205ENST00000494518 RIC8AQ9NPQ8 531 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 PADI3Q9ULW8 664 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 GINS2Q9Y248 185 aa14.43□□□□□ -0.1
SKA1-205ENST00000494518 MRPL42Q9Y6G3 142 aaKnown RBP14.43□□□□□ -0.1
SKA1-205ENST00000494518 V9GY48 417 aaPredicted RBP14.43□□□□□ -0.1
SKA1-205ENST00000494518 SMCO2A6NFE2 343 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 GOLGA8AA7E2F4 631 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 GOLGA8BA8MQT2 603 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 C5orf67F2Z3F1 127 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 M0QZ92 97 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 MAFGO15525 162 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 DGKIO75912 1065 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 RB1P06400 928 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 ZNF76P36508 570 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 LTBRP36941 435 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 STAT5BP51692 787 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 FUT2Q10981 343 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 PAK2Q13177 524 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 CEP55Q53EZ4 464 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 IER5Q5VY09 327 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 JAKMIP3Q5VZ66 844 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 RASEFQ8IZ41 740 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 CLP1Q92989 425 aaKnown RBP14.42□□□□□ -0.1
SKA1-205ENST00000494518 RBM28Q9NW13 759 aaKnown RBP14.42□□□□□ -0.1
SKA1-205ENST00000494518 RWDD3Q9Y3V2 267 aa14.42□□□□□ -0.1
SKA1-205ENST00000494518 NFASCO94856 1347 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 KLF18A0A0U1RQI7 1052 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 POTEB3A0JP26 581 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 BACH1O14867 736 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 ADAMTS3O15072 1205 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 CCNE2O96020 404 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 CPA1P15085 419 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 DNAJB1P25685 340 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 CDC27P30260 824 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 ZP2Q05996 745 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 COL19A1Q14993 1142 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 PUS10Q3MIT2 529 aaKnown RBP14.41□□□□□ -0.1
SKA1-205ENST00000494518 RNF20Q5VTR2 975 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 PPP1R18Q6NYC8 613 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 POTEBQ6S5H4 581 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 MTHFD1LQ6UB35 978 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 TRMT1LQ7Z2T5 733 aaKnown RBP14.41□□□□□ -0.1
SKA1-205ENST00000494518 NPAS4Q8IUM7 802 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 CELF4Q9BZC1 486 aaKnown RBP14.41□□□□□ -0.1
SKA1-205ENST00000494518 LMAN2LQ9H0V9 348 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 TMX1Q9H3N1 280 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 PCDHGC5Q9Y5F6 944 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 PCDHA2Q9Y5H9 948 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 IGSF9BQ9UPX0 1349 aa14.41□□□□□ -0.1
SKA1-205ENST00000494518 WDFY4Q6ZS81 3184 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 ZNF318Q5VUA4 2279 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 TBX10O75333 385 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 MMP1P03956 469 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 ITGB1P05556 798 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 SCG2P13521 617 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 IRS1P35568 1242 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 KRT76Q01546 638 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 EXOSC10Q01780 885 aaKnown RBP14.4□□□□□ -0.1
SKA1-205ENST00000494518 NFX1Q12986 1120 aaKnown RBP14.4□□□□□ -0.1
SKA1-205ENST00000494518 CAMK1Q14012 370 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 PLPPR4Q7Z2D5 763 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 ADGRD2Q7Z7M1 963 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 CCDC60Q8IWA6 550 aaPredicted RBP14.4□□□□□ -0.1
SKA1-205ENST00000494518 FTHL17Q9BXU8 183 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 CDHR5Q9HBB8 845 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 FAM217BQ9NTX9 383 aaPredicted RBP14.4□□□□□ -0.1
SKA1-205ENST00000494518 BARHL2Q9NY43 387 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 LRFN2Q9ULH4 789 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 PLAGL2Q9UPG8 496 aa14.4□□□□□ -0.1
SKA1-205ENST00000494518 TECTAO75443 2155 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 SMIM35A0A1B0GVV1 85 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 FAM86B1E9PN63 330 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 MEIS1O00470 390 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 MGEA5O60502 916 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 PPFIA3O75145 1194 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 FOSP01100 380 aaPredicted RBP14.39□□□□□ -0.11
SKA1-205ENST00000494518 FAM86B2P0C5J1 330 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 KLRC1P26715 233 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 SREBF1P36956 1147 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 CTC1Q2NKJ3 1217 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 DHX32Q7L7V1 743 aaKnown RBP14.39□□□□□ -0.11
SKA1-205ENST00000494518 PLA2G4DQ86XP0 818 aa14.39□□□□□ -0.11
SKA1-205ENST00000494518 CMTR2Q8IYT2 770 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms