RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 SETQ01105 290 aaPredicted RBP18.91■□□□□ 0.62
PTPRU-208ENST00000493601 JAKMIP3Q5VZ66 844 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 BLOC1S2Q6QNY1 142 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 PLA2G4DQ86XP0 818 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 REXO1Q8N1G1 1221 aaKnown RBP18.91■□□□□ 0.62
PTPRU-208ENST00000493601 BANK1Q8NDB2 785 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 TRAPPC12Q8WVT3 735 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 BRF1Q92994 677 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 NSUN3Q9H649 340 aaKnown RBP18.91■□□□□ 0.62
PTPRU-208ENST00000493601 AGO3Q9H9G7 860 aaKnown RBP18.91■□□□□ 0.62
PTPRU-208ENST00000493601 C6orf50Q9HD87 102 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 IGSF9BQ9UPX0 1349 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 IGKV6D-21A0A0A0MT36 114 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 SMIM35A0A1B0GVV1 85 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 FAM86B1E9PN63 330 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 DDX39AO00148 427 aaKnown RBP18.9■□□□□ 0.62
PTPRU-208ENST00000493601 IPO5O00410 1097 aaKnown RBP18.9■□□□□ 0.62
PTPRU-208ENST00000493601 CCNE2O96020 404 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 RB1P06400 928 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 CYP3A4P08684 503 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 FAM86B2P0C5J1 330 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 CPA1P15085 419 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 HSPA4P34932 840 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 TMEM62Q0P6H9 643 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 PAK2Q13177 524 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 MIS18BP1Q6P0N0 1132 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 MTHFD1LQ6UB35 978 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 NME8Q8N427 588 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 CRYGNQ8WXF5 182 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 CLP1Q92989 425 aaKnown RBP18.9■□□□□ 0.62
PTPRU-208ENST00000493601 ZMYND12Q9H0C1 365 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 SNX14Q9Y5W7 946 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 COL1A2P08123 1366 aa18.9■□□□□ 0.62
PTPRU-208ENST00000493601 MYH9P35579 1960 aaKnown RBP18.9■□□□□ 0.62
PTPRU-208ENST00000493601 KIAA1671Q9BY89 1806 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 IGLV3-22A0A075B6J6 115 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 HBP1O60381 514 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 REC8O95072 547 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 BMPR1AP36894 532 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 AKAP17AQ02040 695 aaKnown RBP18.89■□□□□ 0.61
PTPRU-208ENST00000493601 BTG3Q14201 252 aaPredicted RBP18.89■□□□□ 0.61
PTPRU-208ENST00000493601 ABHD15Q6UXT9 468 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 FBXL16Q8N461 479 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 ATP8B4Q8TF62 1192 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 LINC01599Q8WXQ3 324 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 ZNF689Q96CS4 500 aaPredicted RBP18.89■□□□□ 0.61
PTPRU-208ENST00000493601 CELF4Q9BZC1 486 aaKnown RBP18.89■□□□□ 0.61
PTPRU-208ENST00000493601 LMAN2LQ9H0V9 348 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 TCEAL9Q9UHQ7 104 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 KDM3AQ9Y4C1 1321 aa18.89■□□□□ 0.61
PTPRU-208ENST00000493601 PRPF3O43395 683 aaKnown RBP18.88■□□□□ 0.61
PTPRU-208ENST00000493601 DGKIO75912 1065 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 LINC00271P0C7V0 271 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 RPS6KB1P23443 525 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 GNA11P29992 359 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 KRT76Q01546 638 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 PUS10Q3MIT2 529 aaKnown RBP18.88■□□□□ 0.61
PTPRU-208ENST00000493601 TCEAL5Q5H9L2 206 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 PDXDC2PQ6P474 469 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 FAM43BQ6ZT52 329 aaPredicted RBP18.88■□□□□ 0.61
PTPRU-208ENST00000493601 NPAS4Q8IUM7 802 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 CCDC60Q8IWA6 550 aaPredicted RBP18.88■□□□□ 0.61
PTPRU-208ENST00000493601 BICD2Q8TD16 824 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 ZNF577Q9BSK1 485 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 ZNF302Q9NR11 478 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 TBC1D22BQ9NU19 505 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 PADI3Q9ULW8 664 aa18.88■□□□□ 0.61
PTPRU-208ENST00000493601 DHX15O43143 795 aaKnown RBP18.87■□□□□ 0.61
PTPRU-208ENST00000493601 STAG3L1P0CL83 205 aa18.87■□□□□ 0.61
PTPRU-208ENST00000493601 KLRC1P26715 233 aa18.87■□□□□ 0.61
PTPRU-208ENST00000493601 PSMA5P28066 241 aa18.87■□□□□ 0.61
PTPRU-208ENST00000493601 PKN1Q16512 942 aa18.87■□□□□ 0.61
PTPRU-208ENST00000493601 PTCRAQ6ISU1 281 aaPredicted RBP18.87■□□□□ 0.61
PTPRU-208ENST00000493601 SMAP1Q8IYB5 467 aaPredicted RBP18.87■□□□□ 0.61
PTPRU-208ENST00000493601 CMTR2Q8IYT2 770 aaKnown RBP18.87■□□□□ 0.61
PTPRU-208ENST00000493601 CCDC148Q8NFR7 591 aa18.87■□□□□ 0.61
PTPRU-208ENST00000493601 PABPC5Q96DU9 382 aaKnown RBP18.87■□□□□ 0.61
PTPRU-208ENST00000493601 CCDC136Q96JN2 1154 aa18.87■□□□□ 0.61
PTPRU-208ENST00000493601 PLVAPQ9BX97 442 aa18.87■□□□□ 0.61
PTPRU-208ENST00000493601 AGXT2Q9BYV1 514 aa18.87■□□□□ 0.61
PTPRU-208ENST00000493601 NCK2O43639 380 aa18.86■□□□□ 0.61
PTPRU-208ENST00000493601 COL19A1Q14993 1142 aa18.86■□□□□ 0.61
PTPRU-208ENST00000493601 ZNF484Q5JVG2 852 aa18.86■□□□□ 0.61
PTPRU-208ENST00000493601 ZNF746Q6NUN9 644 aaPredicted RBP18.86■□□□□ 0.61
PTPRU-208ENST00000493601 SWSAP1Q6NVH7 229 aa18.86■□□□□ 0.61
PTPRU-208ENST00000493601 CKAP2LQ8IYA6 745 aa18.86■□□□□ 0.61
PTPRU-208ENST00000493601 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.86■□□□□ 0.61
PTPRU-208ENST00000493601 NEK9Q8TD19 979 aa18.86■□□□□ 0.61
PTPRU-208ENST00000493601 PHKBQ93100 1093 aa18.86■□□□□ 0.61
PTPRU-208ENST00000493601 RNF26Q9BY78 433 aaPredicted RBP18.86■□□□□ 0.61
PTPRU-208ENST00000493601 EVPLQ92817 2033 aa18.86■□□□□ 0.61
PTPRU-208ENST00000493601 WDR81Q562E7 1941 aa18.86■□□□□ 0.61
PTPRU-208ENST00000493601 ODR4Q5SWX8 454 aa18.85■□□□□ 0.61
PTPRU-208ENST00000493601 RTN4RL1Q86UN2 441 aaPredicted RBP18.85■□□□□ 0.61
PTPRU-208ENST00000493601 CRIPAKQ8N1N5 446 aa18.85■□□□□ 0.61
PTPRU-208ENST00000493601 BBXQ8WY36 941 aaPredicted RBP18.85■□□□□ 0.61
PTPRU-208ENST00000493601 FAM50BQ9Y247 325 aa18.85■□□□□ 0.61
PTPRU-208ENST00000493601 GRXCR2A6NFK2 248 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 ZBTB42B2RXF5 422 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 H3BQ06 376 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms