RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 LTV1Q96GA3 475 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 GSDMAQ96QA5 445 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 DSCC1Q9BVC3 393 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 TIPINQ9BVW5 301 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PRR14Q9BWN1 585 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CDK19Q9BWU1 502 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MIS12Q9H081 205 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 NSRP1Q9H0G5 558 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 UNC45AQ9H3U1 944 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CCDC134Q9H6E4 229 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 RNPEPL1Q9HAU8 725 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ARHGEF10LQ9HCE6 1279 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PICK1Q9NRD5 415 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 RBM12Q9NTZ6 932 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 BABAM1Q9NWV8 329 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 DDX25Q9UHL0 483 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PAIP2BQ9ULR5 123 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ARHGEF28Q8N1W1 1705 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ATP7AQ04656 1500 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MACROD2A1Z1Q3 448 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 GRID2IPA4D2P6 1211 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MAGEA13PA6NCF6 341 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 E7EWF7 191 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CPLX1O14810 134 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 BACH1O14867 736 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PFDN1O60925 122 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 UBOX5O94941 541 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PDHA1P08559 390 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 KRT16P08779 473 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MYBP10242 640 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PAX3P23760 479 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CTNNA1P35221 906 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 SKIV2L2P42285 1042 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 RAD23BP54727 409 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 EIF3BP55884 814 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 STX17P56962 302 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MAGOHP61326 146 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MRPS25P82663 173 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 FKBP4Q02790 459 aaKnown RBP eCLIP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 UBXN1Q04323 297 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PPARAQ07869 468 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 LSAMPQ13449 338 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 SPA17Q15506 151 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PARP6Q2NL67 630 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 KBTBD12Q3ZCT8 623 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 TCP11X2Q5H9J9 407 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 BEND3Q5T5X7 828 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 LDLRAD1Q5T700 205 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 BICDL1Q6ZP65 573 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CEP128Q6ZU80 1094 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 RAB11FIP4Q86YS3 637 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MB21D1Q8N884 522 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ENDOVQ8N8Q3 282 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 RBBP8NLQ8NC74 664 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 WDR66Q8TBY9 1149 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 DNAJC9Q8WXX5 260 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PPP2R3CQ969Q6 453 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MAGOHBQ96A72 148 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 GBP5Q96PP8 586 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ELAC2Q9BQ52 826 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 BRD8Q9H0E9 1235 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ISCUQ9H1K1 167 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 VPS16Q9H269 839 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 THAP9Q9H5L6 903 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 NHEJ1Q9H9Q4 299 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 LARSQ9P2J5 1176 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 TUBGCP4Q9UGJ1 667 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 DUSP10Q9Y6W6 482 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 COMMD3-BMI1R4GMX3 469 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PPLO60437 1756 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 N4BP2Q86UW6 1770 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MYH8P13535 1937 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 COL15A1P39059 1388 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 DLC1Q96QB1 1528 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 KCNJ18B7U540 433 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 F8VZ95 297 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 SART1O43290 800 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 ATP5HO75947 161 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 LMNAP02545 664 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 CCT6AP40227 531 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 BPIFB4P59827 614 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 ZC3H6P61129 1189 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 PHEXP78562 749 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 TMEM62Q0P6H9 643 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 CBX3Q13185 183 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 KCNJ12Q14500 433 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 TAF7Q15545 349 aaPredicted RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 USH1GQ495M9 461 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 CCDC152Q4G0S7 254 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 NAALADL2Q58DX5 795 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 SPDYCQ5MJ68 293 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 FKBP15Q5T1M5 1219 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 KRT40Q6A162 431 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF787Q6DD87 383 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 KLHL10Q6JEL2 608 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 TRIM67Q6ZTA4 783 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 TMC7Q7Z402 723 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 LONP2Q86WA8 852 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 VPS37DQ86XT2 251 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 LRRC34Q8IZ02 419 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms