RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 EDEM2Q9BV94 578 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 SMOC1Q9H4F8 434 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 ENTPD7Q9NQZ7 604 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 C9orf78Q9NZ63 289 aaPredicted RBP9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 MYH15Q9Y2K3 1946 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 USP9YO00507 2555 aaPredicted RBP9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 ENPP3O14638 875 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 AXIN1O15169 862 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 CLASP2O75122 1294 aaKnown RBP9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 FZD5Q13467 585 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 PPP2R5DQ14738 602 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 MLF2Q15773 248 aaPredicted RBP9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 PCSK4Q6UW60 755 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 RSPO2Q6UXX9 243 aaPredicted RBP9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 TMC5Q6UXY8 1006 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 GPR149Q86SP6 731 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 BBXQ8WY36 941 aaPredicted RBP9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 LOXL4Q96JB6 756 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 ACAD9Q9H845 621 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 HOMER2Q9NSB8 354 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 IFT57Q9NWB7 429 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 NAV3Q8IVL0 2385 aa9.07□□□□□ -0.96
EXOSC3-206ENST00000489414 NF1P21359 2839 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 AHCTF1Q8WYP5 2266 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 H0Y626 953 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 CAND2O75155 1236 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 TRIM16O95361 564 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 CTSHP09668 335 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 TARSP26639 723 aaKnown RBP9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 OAZ1P54368 228 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 C4orf17Q53FE4 359 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 TCEAL6Q6IPX3 200 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 TTC6Q86TZ1 520 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 DEFB124Q8NES8 71 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 MRPS27Q92552 414 aaKnown RBP9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 TCEAL3Q969E4 200 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 PRORYQ9H606 182 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 SLC38A10Q9HBR0 1119 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 PAXBP1Q9Y5B6 917 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
EXOSC3-206ENST00000489414 MYH8P13535 1937 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 FNDC1Q4ZHG4 1894 aaPredicted RBP9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 SHISA7A6NL88 538 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 B8ZZF3 427 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 F6X3S4 739 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 HAS3O00219 553 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 ZBED4O75132 1171 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 NBPF7P0C2Y1 421 aaPredicted RBP9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 CD72P21854 359 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 PDE4AP27815 886 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 RAP1GAPP47736 663 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 PSEN2P49810 448 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 PDE4BQ07343 736 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 ADCY1Q08828 1119 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 CCDC27Q2M243 656 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 PI16Q6UXB8 463 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 THNSL1Q8IYQ7 743 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 LRRC47Q8N1G4 583 aaKnown RBP9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 CHCHD4Q8N4Q1 142 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 PRPF38AQ8NAV1 312 aaKnown RBP9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 ALG1Q9BT22 464 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 KATNAL1Q9BW62 490 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 HMG20BQ9P0W2 317 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 DKK4Q9UBT3 224 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 NXF1Q9UBU9 619 aaKnown RBP9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 CSMD1Q96PZ7 3565 aa9.05□□□□□ -0.96
EXOSC3-206ENST00000489414 C2orf71A6NGG8 1288 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 ANHXE9PGG2 379 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 NCAM2O15394 837 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 RAD21O60216 631 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 F2P00734 622 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 ABCG1P45844 678 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 RFX5P48382 616 aaPredicted RBP9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 GPC5P78333 572 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 PLCB3Q01970 1234 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 SERINC3Q13530 473 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 MFSD10Q14728 455 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 KIAA0753Q2KHM9 967 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 NAA16Q6N069 864 aaPredicted RBP9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 RAB44Q7Z6P3 723 aaPredicted RBP9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 NPAS4Q8IUM7 802 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 SCUBE3Q8IX30 993 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 MRPL43Q8N983 215 aaKnown RBP9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 GOPCQ9HD26 462 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 VPS45Q9NRW7 570 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 FAM217BQ9NTX9 383 aaPredicted RBP9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 PCDHGA5Q9Y5G8 931 aa9.04□□□□□ -0.96
EXOSC3-206ENST00000489414 CHURC1-FNTBB4DL54 471 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 EPCAMP16422 314 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 CASTP20810 708 aaKnown RBP9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 GBP2P32456 591 aaPredicted RBP9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 MPLP40238 635 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 FNTBP49356 437 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 GATMP50440 423 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 CCR3P51677 355 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 GNAI1P63096 354 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 HTR4Q13639 388 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 SLC44A4Q53GD3 710 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 CEP68Q76N32 757 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms