RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 EVPLQ92817 2033 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 PFKFB2O60825 505 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 CHRNA1P02708 482 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 PSAPP07602 524 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 GHRP10912 638 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 SCRN1Q12765 414 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 FAM117BQ6P1L5 589 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 TMCO2Q7Z6W1 182 aaPredicted RBP15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 BLIDQ8IZY5 108 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 USP38Q8NB14 1042 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 TBCKQ8TEA7 893 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 LENG9Q96B70 501 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 FAM49AQ9H0Q0 323 aaPredicted RBP15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 TSPYL2Q9H2G4 693 aaPredicted RBP15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 CERS4Q9HA82 394 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 PCDHA10Q9Y5I2 948 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 CDY2AQ9Y6F7 541 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 SQORQ9Y6N5 450 aa15.64■□□□□ 0.09
SPTLC1-207ENST00000488921 SMIM35A0A1B0GVV1 85 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 LCHNA4D1U4 455 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 WDR64B1ANS9 1081 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 POU3F3P20264 500 aaPredicted RBP15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 HTRA4P83105 476 aaPredicted RBP15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 ZNF484Q5JVG2 852 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 FBXO47Q5MNV8 452 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 SWSAP1Q6NVH7 229 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 TSHZ1Q6ZSZ6 1077 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 CKAP2LQ8IYA6 745 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 NME8Q8N427 588 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 PPM1EQ8WY54 764 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 IL17RAQ96F46 866 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 FAM167AQ96KS9 214 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 TGS1Q96RS0 853 aaKnown RBP15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 RIT2Q99578 217 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 TPCN1Q9ULQ1 816 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 CEP131Q9UPN4 1083 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 SAMM50Q9Y512 469 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 TRPV2Q9Y5S1 764 aa15.63■□□□□ 0.09
SPTLC1-207ENST00000488921 LINC01553A4QN01 128 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 GAS7O60861 476 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 ARHGEF15O94989 841 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 AK2P54819 239 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 LPIN1Q14693 890 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 NONOQ15233 471 aaKnown RBP eCLIP15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 MTHFD1LQ6UB35 978 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 MOXD1Q6UVY6 613 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 KRT25Q7Z3Z0 450 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 MICALL1Q8N3F8 863 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 TRAPPC12Q8WVT3 735 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 BBXQ8WY36 941 aaPredicted RBP15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 WASF1Q92558 559 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 TOP1MTQ969P6 601 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 SAMD11Q96NU1 681 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 YME1L1Q96TA2 773 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 TEKT3Q9BXF9 490 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 THEGQ9P2T0 379 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 MAFBQ9Y5Q3 323 aaPredicted RBP15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 IGSF9BQ9UPX0 1349 aa15.62■□□□□ 0.09
SPTLC1-207ENST00000488921 A0A0C4DFX4 3053 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 M0R2N6 131 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 MSH4O15457 936 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 SFNP31947 248 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 JAK3P52333 1124 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 ERVK-21P61565 698 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 CCDC85BQ15834 202 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 Q4G0T1 1027 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 LRCH2Q5VUJ6 765 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 FAM43BQ6ZT52 329 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 SP7Q8TDD2 431 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 SYMPKQ92797 1274 aaKnown RBP15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 SLC5A5Q92911 643 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 AIFM3Q96NN9 605 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 UIMC1Q96RL1 719 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 FTHL17Q9BXU8 183 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 OSBPL7Q9BZF2 842 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 MTCH2Q9Y6C9 303 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 KDM3AQ9Y4C1 1321 aa15.61■□□□□ 0.09
SPTLC1-207ENST00000488921 TTC3P53804 2025 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 CYP3A7-CYP3A51PA0A087WV96 503 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 CCDC194A0A1B0GVG4 234 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 EPOPA6NHQ4 379 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 RFXAPO00287 272 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 UPP2O95045 317 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 CYP3A7P24462 503 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 KLRC1P26715 233 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 GRB10Q13322 594 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 RDM1Q8NG50 284 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 ATXN2LQ8WWM7 1075 aaKnown RBP15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 ZBTB10Q96DT7 871 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 PHF20Q9BVI0 1012 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 CELF4Q9BZC1 486 aaKnown RBP15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 DISC1Q9NRI5 854 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 LMCD1Q9NZU5 365 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 GABBR1Q9UBS5 961 aa15.6■□□□□ 0.09
SPTLC1-207ENST00000488921 TMEM62Q0P6H9 643 aa15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 PAK2Q13177 524 aa15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 NPY5RQ15761 445 aa15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 TJAP1Q5JTD0 557 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms