RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 ZNF131P52739 623 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 ERVK-24P63145 666 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 MRPS9P82933 396 aaKnown RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 BAATQ14032 418 aaPredicted RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 SLC30A10Q6XR72 485 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 TRIM59Q8IWR1 403 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 TXLNBQ8N3L3 684 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 SLC17A8Q8NDX2 589 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 GLIS3Q8NEA6 775 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 CHST13Q8NET6 341 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 NSUN6Q8TEA1 469 aaKnown RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 PIGOQ8TEQ8 1089 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 CCDC43Q96MW1 224 aaKnown RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 DESI2Q9BSY9 194 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 PARP14Q460N5 1801 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 SBF1O95248 1867 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 WDR64B1ANS9 1081 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 RNF225M0QZC1 329 aaPredicted RBP13.14□□□□□ -0.31
SND1-210ENST00000483503 NDUFA10O95299 355 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 EPB41P11171 864 aaKnown RBP13.14□□□□□ -0.31
SND1-210ENST00000483503 NR2F2P24468 414 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 MTF1Q14872 753 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 ZNF746Q6NUN9 644 aaPredicted RBP13.14□□□□□ -0.31
SND1-210ENST00000483503 ZNF662Q6ZS27 426 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 VSIG10LQ86VR7 867 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 IL31RAQ8NI17 732 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 EEF2KMTQ96G04 330 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 SENP7Q9BQF6 1050 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 CGNQ9P2M7 1197 aaKnown RBP13.14□□□□□ -0.31
SND1-210ENST00000483503 ARMCX3Q9UH62 379 aaPredicted RBP13.14□□□□□ -0.31
SND1-210ENST00000483503 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
SND1-210ENST00000483503 SSC5DA1L4H1 1573 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 EIF3CLB5ME19 914 aaKnown RBP13.13□□□□□ -0.31
SND1-210ENST00000483503 DDX39AO00148 427 aaKnown RBP13.13□□□□□ -0.31
SND1-210ENST00000483503 NR3C2P08235 984 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 MYBP10242 640 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 PSMC5P62195 406 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 ITGB3BPQ13352 177 aaPredicted RBP13.13□□□□□ -0.31
SND1-210ENST00000483503 DGKZQ13574 1117 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 MYBPC2Q14324 1141 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 HS2ST1Q7LGA3 356 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 CACNA2D4Q7Z3S7 1137 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 FAM178BQ8IXR5 827 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 C4orf19Q8IY42 314 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 EHBP1Q8NDI1 1231 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 SYN2Q92777 582 aaPredicted RBP13.13□□□□□ -0.31
SND1-210ENST00000483503 IWS1Q96ST2 819 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 EIF3CQ99613 913 aaKnown RBP13.13□□□□□ -0.31
SND1-210ENST00000483503 FGFBP2Q9BYJ0 223 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
SND1-210ENST00000483503 HAUS4Q9H6D7 363 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 ANKEF1Q9NU02 776 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 CEP72Q9P209 647 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
SND1-210ENST00000483503 ZNF214Q9UL59 606 aaPredicted RBP13.13□□□□□ -0.31
SND1-210ENST00000483503 PLAGL2Q9UPG8 496 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 SAMM50Q9Y512 469 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 NFASCO94856 1347 aa13.13□□□□□ -0.31
SND1-210ENST00000483503 RASSF10A6NK89 507 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 URI1O94763 535 aaPredicted RBP13.12□□□□□ -0.31
SND1-210ENST00000483503 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
SND1-210ENST00000483503 PRPF6O94906 941 aaKnown RBP13.12□□□□□ -0.31
SND1-210ENST00000483503 NR3C1P04150 777 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 TMEM132BQ14DG7 1078 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 GNPTABQ3T906 1256 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 ODR4Q5SWX8 454 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 WDR59Q6PJI9 974 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
SND1-210ENST00000483503 ZNF720Q7Z2F6 126 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 SMAP1Q8IYB5 467 aaPredicted RBP13.12□□□□□ -0.31
SND1-210ENST00000483503 PROCA1Q8NCQ7 364 aaPredicted RBP13.12□□□□□ -0.31
SND1-210ENST00000483503 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 ZC3H15Q8WU90 426 aaKnown RBP13.12□□□□□ -0.31
SND1-210ENST00000483503 CCDC42Q96M95 316 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
SND1-210ENST00000483503 MKNK1Q9BUB5 465 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 TSGA10Q9BZW7 698 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 LZTFL1Q9NQ48 299 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 AGPAT5Q9NUQ2 364 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
SND1-210ENST00000483503 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 SNCAIPQ9Y6H5 919 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 PFASO15067 1338 aa13.12□□□□□ -0.31
SND1-210ENST00000483503 RLFQ13129 1914 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 CXCL11O14625 94 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 KRT86O43790 486 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 HIP1RO75146 1068 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 AFPP02771 609 aaKnown RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 XRCC5P13010 732 aaKnown RBP13.11□□□□□ -0.31
SND1-210ENST00000483503 COPB2P35606 906 aa13.11□□□□□ -0.31
SND1-210ENST00000483503 PSMC2P35998 433 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms