RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 SLC26A2P50443 739 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 BTG3Q14201 252 aaPredicted RBP18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 TCEAL5Q5H9L2 206 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 BLOC1S2Q6QNY1 142 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 MTHFD1LQ6UB35 978 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 ABHD15Q6UXT9 468 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 NIPA1Q7RTP0 329 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 CELF4Q9BZC1 486 aaKnown RBP18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 PADI3Q9ULW8 664 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 SNX14Q9Y5W7 946 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 SQORQ9Y6N5 450 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 NLRC5Q86WI3 1866 aa18.86■□□□□ 0.61
RAB11FIP3-209ENST00000483002 IGKV6D-21A0A0A0MT36 114 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 SMIM35A0A1B0GVV1 85 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 ADAMTS3O15072 1205 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 PPFIA3O75145 1194 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 DGKIO75912 1065 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 RB1P06400 928 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 KLRC1P26715 233 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 HSPA4P34932 840 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 KRT76Q01546 638 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 FAM160B1Q5W0V3 765 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 SWSAP1Q6NVH7 229 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 NME8Q8N427 588 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 LINC01599Q8WXQ3 324 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 KCNB2Q92953 911 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 FTHL17Q9BXU8 183 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 ZMYND12Q9H0C1 365 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 NSUN3Q9H649 340 aaKnown RBP18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 C6orf50Q9HD87 102 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 CD320Q9NPF0 282 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 GINS2Q9Y248 185 aa18.85■□□□□ 0.61
RAB11FIP3-209ENST00000483002 LOXHD1Q8IVV2 1947 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 C5orf67F2Z3F1 127 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 H3BQ06 376 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 IPO5O00410 1097 aaKnown RBP18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 GRM6O15303 877 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 DHX15O43143 795 aaKnown RBP18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 HBP1O60381 514 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 CYP3A4P08684 503 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 LINC00271P0C7V0 271 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 PAK2Q13177 524 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 PKN1Q16512 942 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 PTCRAQ6ISU1 281 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 MIS18BP1Q6P0N0 1132 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 PDXDC2PQ6P474 469 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 CCDC60Q8IWA6 550 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 CCDC12Q8WUD4 166 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 PHKBQ93100 1093 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 ZNF689Q96CS4 500 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 ZNF577Q9BSK1 485 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 C11orf84Q9BUA3 381 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 RC3H2Q9HBD1 1191 aaKnown RBP18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 ZNF302Q9NR11 478 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 RWDD3Q9Y3V2 267 aa18.84■□□□□ 0.61
RAB11FIP3-209ENST00000483002 IGSF9BQ9UPX0 1349 aa18.83■□□□□ 0.61
RAB11FIP3-209ENST00000483002 IGLV3-22A0A075B6J6 115 aa18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 ESYT2A0FGR8 921 aa18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 PRPF3O43395 683 aaKnown RBP18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 IL9P15248 144 aa18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 IBSPP21815 317 aaPredicted RBP18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 AKAP17AQ02040 695 aaKnown RBP18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 NFX1Q12986 1120 aaKnown RBP18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 TMEM266Q2M3C6 531 aa18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 TRMT1LQ7Z2T5 733 aaKnown RBP18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 CKAP2LQ8IYA6 745 aa18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 REXO1Q8N1G1 1221 aaKnown RBP18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 ATP8B4Q8TF62 1192 aa18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 CRYGNQ8WXF5 182 aa18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 KHSRPQ92945 711 aaKnown RBP eCLIP18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 CLP1Q92989 425 aaKnown RBP18.83■□□□□ 0.6
RAB11FIP3-209ENST00000483002 COL4A6Q14031 1691 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 CSPG5O95196 566 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 RPS6KB1P23443 525 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 GNA11P29992 359 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 MCTP2Q6DN12 878 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 NPAS4Q8IUM7 802 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 FAM178BQ8IXR5 827 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 NEK9Q8TD19 979 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 RASGRP4Q8TDF6 673 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 PABPC5Q96DU9 382 aaKnown RBP18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 CDHR5Q9HBB8 845 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 TBC1D22BQ9NU19 505 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 CLDND1Q9NY35 253 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 EVPLQ92817 2033 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 RALGAPA2Q2PPJ7 1873 aa18.82■□□□□ 0.6
RAB11FIP3-209ENST00000483002 KDM3AQ9Y4C1 1321 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 GRXCR2A6NFK2 248 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 STAG3L1P0CL83 205 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 ATP4AP20648 1035 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 PAN2Q504Q3 1202 aaKnown RBP18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 PRR16Q569H4 304 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 ZNF484Q5JVG2 852 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 KIAA0319LQ8IZA0 1049 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 GJD3Q8N144 294 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 CRIPAKQ8N1N5 446 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 LMAN2LQ9H0V9 348 aa18.81■□□□□ 0.6
RAB11FIP3-209ENST00000483002 TMX1Q9H3N1 280 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms