RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 IPO5O00410 1097 aaKnown RBP13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 FAM86B2P0C5J1 330 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 GHRP10912 638 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 CIITAP33076 1130 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 KRT76Q01546 638 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 LPIN1Q14693 890 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 NTRK3Q16288 839 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 TIGD5Q53EQ6 642 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 ZNF746Q6NUN9 644 aaPredicted RBP13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 MIS18BP1Q6P0N0 1132 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 POTEBQ6S5H4 581 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 ABHD15Q6UXT9 468 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 RUFY3Q7L099 469 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 ATP8B4Q8TF62 1192 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 DNAJB3Q8WWF6 145 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 UHRF1Q96T88 793 aaPredicted RBP13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 C22orf23Q9BZE7 217 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 TMEM260Q9NX78 707 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 TRPV2Q9Y5S1 764 aa13.79□□□□□ -0.2
SQSTM1-207ENST00000481335 C5orf67F2Z3F1 127 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 H3BNC9 293 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 DHX15O43143 795 aaKnown RBP13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 RB1P06400 928 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 BMP1P13497 986 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 CPA1P15085 419 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 EPC2Q52LR7 807 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 ODR4Q5SWX8 454 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 JAKMIP3Q5VZ66 844 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 SPRED2Q7Z698 418 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 TRIM22Q8IYM9 498 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 ZNF710Q8N1W2 664 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 MRPL38Q96DV4 380 aaKnown RBP13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 IL17RAQ96F46 866 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 ZNF577Q9BSK1 485 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 RC3H2Q9HBD1 1191 aaKnown RBP13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 ZNF302Q9NR11 478 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 ADGRA3Q8IWK6 1321 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 IGSF9BQ9UPX0 1349 aa13.78□□□□□ -0.2
SQSTM1-207ENST00000481335 BACH1O14867 736 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 CCNE2O96020 404 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 NEFLP07196 543 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 PDIA3P30101 505 aaKnown RBP13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 IGBP1P78318 339 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 ZNF484Q5JVG2 852 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 KRT40Q6A162 431 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 MTHFD1LQ6UB35 978 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 CCDC60Q8IWA6 550 aaPredicted RBP13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 TMEM192Q8IY95 271 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 PHKBQ93100 1093 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 ZNF274Q96GC6 653 aaPredicted RBP13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 C17orf80Q9BSJ5 609 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 OSBPL7Q9BZF2 842 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 MTUS1Q9ULD2 1270 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 CEP131Q9UPN4 1083 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 CYP46A1Q9Y6A2 500 aa13.77□□□□□ -0.21
SQSTM1-207ENST00000481335 ATG2AQ2TAZ0 1938 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 UPP2O95045 317 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 USP11P51784 963 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 PAK2Q13177 524 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 GALNT17Q6IS24 598 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 PDXDC2PQ6P474 469 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 CPLX2Q6PUV4 134 aaKnown RBP13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 FIBCD1Q8N539 461 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 CLP1Q92989 425 aaKnown RBP13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 ZNF689Q96CS4 500 aaPredicted RBP13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 FAM167AQ96KS9 214 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 C11orf84Q9BUA3 381 aaPredicted RBP13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 CELF4Q9BZC1 486 aaKnown RBP13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 FAM49AQ9H0Q0 323 aaPredicted RBP13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 LMAN2LQ9H0V9 348 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 PCDHA10Q9Y5I2 948 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 MAFBQ9Y5Q3 323 aaPredicted RBP13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
SQSTM1-207ENST00000481335 WDR64B1ANS9 1081 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 ENPP3O14638 875 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 CPLX1O14810 134 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 DEXIO95424 95 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 PSAPP07602 524 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 STAG3L1P0CL83 205 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 TFF2Q03403 129 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 TOB2Q14106 344 aaPredicted RBP13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 ERICH6BQ5W0A0 696 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 NPAS4Q8IUM7 802 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 RIT2Q99578 217 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 PLVAPQ9BX97 442 aa13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 AGO3Q9H9G7 860 aaKnown RBP13.75□□□□□ -0.21
SQSTM1-207ENST00000481335 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 DDX39AO00148 427 aaKnown RBP13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 NCK2O43639 380 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 EIF5BO60841 1220 aaKnown RBP13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 DGKIO75912 1065 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 KLRC1P26715 233 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 CD52P31358 61 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 SFNP31947 248 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 KCNQ1P51787 676 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms