RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 BACH1O14867 736 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 RPLP2P05387 115 aaKnown RBP21.44■■□□□ 1.02
ABCF3-214ENST00000480562 SCG2P13521 617 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 BMPR1AP36894 532 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 BTG3Q14201 252 aaPredicted RBP21.44■■□□□ 1.02
ABCF3-214ENST00000480562 MTHFD1LQ6UB35 978 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 NIPA1Q7RTP0 329 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 KHSRPQ92945 711 aaKnown RBP eCLIP21.44■■□□□ 1.02
ABCF3-214ENST00000480562 KCNB2Q92953 911 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 BRF1Q92994 677 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 C1QTNF1Q9BXJ1 281 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 SNX14Q9Y5W7 946 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 TTC3P53804 2025 aa21.44■■□□□ 1.02
ABCF3-214ENST00000480562 RALGAPA2Q2PPJ7 1873 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 IGKV6D-21A0A0A0MT36 114 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 CCDC196A0A1B0GTZ2 297 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 H3BQ06 376 aaPredicted RBP21.43■■□□□ 1.02
ABCF3-214ENST00000480562 PPFIA3O75145 1194 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 IL9P15248 144 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 ABHD15Q6UXT9 468 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 EP400NLQ6ZTU2 488 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 CCDC60Q8IWA6 550 aaPredicted RBP21.43■■□□□ 1.02
ABCF3-214ENST00000480562 CRYGNQ8WXF5 182 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 ZNF689Q96CS4 500 aaPredicted RBP21.43■■□□□ 1.02
ABCF3-214ENST00000480562 CELF4Q9BZC1 486 aaKnown RBP21.43■■□□□ 1.02
ABCF3-214ENST00000480562 NSUN3Q9H649 340 aaKnown RBP21.43■■□□□ 1.02
ABCF3-214ENST00000480562 PADI3Q9ULW8 664 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 SQORQ9Y6N5 450 aa21.43■■□□□ 1.02
ABCF3-214ENST00000480562 IGLV3-22A0A075B6J6 115 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 SMIM35A0A1B0GVV1 85 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 C5orf67F2Z3F1 127 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 GRM6O15303 877 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 DHX15O43143 795 aaKnown RBP21.42■■□□□ 1.02
ABCF3-214ENST00000480562 DGKIO75912 1065 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 RB1P06400 928 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 KLRC1P26715 233 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 HSPA4P34932 840 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 PAK2Q13177 524 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 PKN1Q16512 942 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 TMEM266Q2M3C6 531 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 FAM160B1Q5W0V3 765 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 PTCRAQ6ISU1 281 aaPredicted RBP21.42■■□□□ 1.02
ABCF3-214ENST00000480562 BLOC1S2Q6QNY1 142 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 C11orf84Q9BUA3 381 aaPredicted RBP21.42■■□□□ 1.02
ABCF3-214ENST00000480562 IGSF9BQ9UPX0 1349 aa21.42■■□□□ 1.02
ABCF3-214ENST00000480562 LOXHD1Q8IVV2 1947 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 ESYT2A0FGR8 921 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 IPO5O00410 1097 aaKnown RBP21.41■■□□□ 1.02
ABCF3-214ENST00000480562 HBP1O60381 514 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 CSPG5O95196 566 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 CYP3A4P08684 503 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 IBSPP21815 317 aaPredicted RBP21.41■■□□□ 1.02
ABCF3-214ENST00000480562 SLC26A2P50443 739 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 KRT76Q01546 638 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 SWSAP1Q6NVH7 229 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 MIS18BP1Q6P0N0 1132 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 PDXDC2PQ6P474 469 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 REXO1Q8N1G1 1221 aaKnown RBP21.41■■□□□ 1.02
ABCF3-214ENST00000480562 NEK9Q8TD19 979 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 ATP8B4Q8TF62 1192 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 CLP1Q92989 425 aaKnown RBP21.41■■□□□ 1.02
ABCF3-214ENST00000480562 PHKBQ93100 1093 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 FTHL17Q9BXU8 183 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 ZMYND12Q9H0C1 365 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 TMX1Q9H3N1 280 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 C6orf50Q9HD87 102 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 ZNF302Q9NR11 478 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 GINS2Q9Y248 185 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 RWDD3Q9Y3V2 267 aa21.41■■□□□ 1.02
ABCF3-214ENST00000480562 GRXCR2A6NFK2 248 aa21.4■■□□□ 1.02
ABCF3-214ENST00000480562 PRPF3O43395 683 aaKnown RBP21.4■■□□□ 1.02
ABCF3-214ENST00000480562 RPS6KB1P23443 525 aa21.4■■□□□ 1.02
ABCF3-214ENST00000480562 FAM178BQ8IXR5 827 aa21.4■■□□□ 1.02
ABCF3-214ENST00000480562 CRIPAKQ8N1N5 446 aa21.4■■□□□ 1.02
ABCF3-214ENST00000480562 NME8Q8N427 588 aa21.4■■□□□ 1.02
ABCF3-214ENST00000480562 RASGRP4Q8TDF6 673 aa21.4■■□□□ 1.02
ABCF3-214ENST00000480562 PABPC5Q96DU9 382 aaKnown RBP21.4■■□□□ 1.02
ABCF3-214ENST00000480562 ZNF577Q9BSK1 485 aa21.4■■□□□ 1.02
ABCF3-214ENST00000480562 MRPL42Q9Y6G3 142 aaKnown RBP21.4■■□□□ 1.02
ABCF3-214ENST00000480562 KDM3AQ9Y4C1 1321 aa21.39■■□□□ 1.01
ABCF3-214ENST00000480562 ATP4AP20648 1035 aa21.39■■□□□ 1.01
ABCF3-214ENST00000480562 GATMP50440 423 aa21.39■■□□□ 1.01
ABCF3-214ENST00000480562 NFX1Q12986 1120 aaKnown RBP21.39■■□□□ 1.01
ABCF3-214ENST00000480562 PAN2Q504Q3 1202 aaKnown RBP21.39■■□□□ 1.01
ABCF3-214ENST00000480562 TRMT1LQ7Z2T5 733 aaKnown RBP21.39■■□□□ 1.01
ABCF3-214ENST00000480562 NPAS4Q8IUM7 802 aa21.39■■□□□ 1.01
ABCF3-214ENST00000480562 KIAA0319LQ8IZA0 1049 aa21.39■■□□□ 1.01
ABCF3-214ENST00000480562 CCDC12Q8WUD4 166 aaPredicted RBP21.39■■□□□ 1.01
ABCF3-214ENST00000480562 LMAN2LQ9H0V9 348 aa21.39■■□□□ 1.01
ABCF3-214ENST00000480562 CDHR5Q9HBB8 845 aa21.39■■□□□ 1.01
ABCF3-214ENST00000480562 ALG13Q9NP73 1137 aaKnown RBP21.39■■□□□ 1.01
ABCF3-214ENST00000480562 CLDND1Q9NY35 253 aa21.39■■□□□ 1.01
ABCF3-214ENST00000480562 NID2Q14112 1375 aa21.38■■□□□ 1.01
ABCF3-214ENST00000480562 ZBTB42B2RXF5 422 aa21.38■■□□□ 1.01
ABCF3-214ENST00000480562 AKAP17AQ02040 695 aaKnown RBP21.38■■□□□ 1.01
ABCF3-214ENST00000480562 COL19A1Q14993 1142 aa21.38■■□□□ 1.01
ABCF3-214ENST00000480562 PRR16Q569H4 304 aa21.38■■□□□ 1.01
ABCF3-214ENST00000480562 ZNF484Q5JVG2 852 aa21.38■■□□□ 1.01
ABCF3-214ENST00000480562 CKAP2LQ8IYA6 745 aa21.38■■□□□ 1.01
ABCF3-214ENST00000480562 GJD3Q8N144 294 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms